Psittacula echo (Mauritius parakeet): 308226770
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Entry
308226770 CDS
T12082
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
pech
Psittacula echo (Mauritius parakeet)
Pathway
pech03030
DNA replication
pech03410
Base excision repair
pech03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pech00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
308226770 (POLE)
03410 Base excision repair
308226770 (POLE)
03420 Nucleotide excision repair
308226770 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pech03032
]
308226770 (POLE)
03400 DNA repair and recombination proteins [BR:
pech03400
]
308226770 (POLE)
Enzymes [BR:
pech01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
308226770 (POLE)
DNA replication proteins [BR:
pech03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
308226770 (POLE)
DNA repair and recombination proteins [BR:
pech03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
308226770 (POLE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
308226770
NCBI-ProteinID:
XP_080484924
LinkDB
All DBs
Position
13:<14857557..>14885692
Genome browser
AA seq
2299 aa
AA seq
DB search
MVLRGGGDSEGARRGRRPGGPWVPAAGADGTAAGRDDGPALSALKRLERSQRTDRLDALF
GFERPAEPGERTGWLINMHPTEVLDEDRRSVSAVDYYFIQEDGSRFKVALPYKPYFYIAT
QKGCEREVSSFLSKKFQGKIAKLETVPKEDLDLPNHLVGLKRNYIKLSFNTVDDLVKVRK
EISPAVRKNRERDQASDVYTAMLSSALSGGVLTMDEDGASRKVANQMDNILDMREYDVPY
HVRLSIDLKIHVAHWYNVRYRGSTYPPEITCRDDLVERPDPVVLAFDIETTKLPLKFPDA
ETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGQFCVFNEPDEAHLIQRWF
EHIQETKPNIIVTYNGDFFDWPFVEARATVHGINMYQEIGFQKDSQGEYKASQCIHMDCL
RWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQILATYSVSDAVATYY
MYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLT
EDGHVLDSETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLVQNVEKTLRHAIEDEEGL
PLDQVTNFQEVCDEIKVKLNSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDE
ATCAACDFNKPGANCQRRMTWQWRGEFMPASRSEYHRIQQQLESEKFPALAPDAAPRAFH
ELSRDEQAKYEKKRLADYCRKAYKKIHVTRVEERVTTICQRENSFYVDTVRAFRDRRYEF
KGLHKVWKKKLSAAVEAGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYS
MEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNAKKPKV
TISYPGAMLNILVKEGFTNDQYQELQDPASLTYITRSENSIFFEVDGPYLAMILPASKEE
GKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLKGSTLEEVYASVAK
VADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQM
VKDAGLSCRFIISKKPEGSPVTERAIPLAIFQAEPSVRKHYLRKWLKSPSLQDFNIRAIL
DWDYYIERLGSTIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKKINELFT
SEGKRQVLTNQPSEGTPNSQIGDIEDFGAAKTRQPAVPIANKRKRVPAAEESQQMSQYLE
LSQSWREILGPPPLLGTTKEQRLVWLRYHQKKWELQARQRRERRKRRRLEDGGEAAAGGG
ARQALSKGLGSYLRQAARSILDLPWQIVQIAETSQPGLFRLWAVIGSDLHCIRLSIPRVF
YVNQRVPKPEEGAAYRKVNRILPRSNLVYNLYEYSVPEDMYQEHINEINADLSAPDIEGV
YETQVPLLLRALMQLGCVCMVSRQLVGHLAGREAETFDIEHLEMRSLAQFTYLEPGSIRH
IYLYHSSQGNKALLGLFIPSQRKAAVFVLDRVRSNQMPNLTTLFSAERSALLEKVGEELL
PPDKHTFEVRAETDPKTIYRAIQRLLLGYKDERRGPTLVAVQSNWDLKRLVSGIPIIEEF
PLVPIQLVDDISYSVLDWQRHAARRMIRHYLNLDMCLSQAFEMSRYYHIPIGNLPSDIST
FGSDLFLSRHLRRHNHLLWLSPTARPDLGGKEADDNRLVMEFDERASVEINNPGCYSTVC
LELDIQSLAVNTVLQSHHINDMEGGSSMSISFDVIQQASLEDMVTGNQAANIPASYDETA
LCSNTFRILKSMVVSWVKEITQYHNVYADNQVIHFYRWLRSPSSLLYDPALHRMLHNMMK
KLFLQLVAEFKRLGSSVVYANFNRIILCTKKRRIEDAISYMEYIINSIHSKEIFHSLTIS
FSRCWEFLLWMDPANYGGIKGKVDSRIHYGEKVTSKSQVLEEEEDSEEEEEVAVGEEEEE
GEPNVEELLENSWNIAQFLPQAASCQSYFLMIVSAYIVAVYHSMKEELRRSAPGSTPVKR
RSTSQVSQEALAEMGAMPGMITFSQDYVANELTQSFFTITQKIQKKMASSRNATEPSDMF
PVLPGSYLPLNNPALEFIKYVCKVLSLDANITNQVNKLRRDLLRLIEVGEFSEAAQFRDP
CRSYVLPEVICRNCNFCRDLDLCKDPALSQDGSAVPGWVCSNCQVQYDSDAIEAALVEVL
QKKLMAFVLQDLVCKKCHGVKERHMPVYCSCAGDFALTISSQTFMDHVKVFQNIARHYSM
AYLLETIEWLLCTNPQLQQ
NT seq
6900 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgcggggcggcggagactctgagggagcgcggaggggtcggcggcctggtggg
ccctgggtgcctgcggcgggggctgacggcacggcggctggcagggacgatggccccgca
ctgtccgctctcaagcgcctggagcgatcgcagcgcaccgatcggctggacgcgcttttc
ggcttcgagcgaccagcggagcccggcgagcggaccggctggctcatcaacatgcacccg
acggaggtgctggatgaggaccggcggtcggtgagcgctgtggactattacttcatccag
gaggacgggagccgcttcaaggtggccctgccctacaagccttacttctacatcgccact
cagaagggctgtgagcgagaagtgtcctccttcctctccaagaagttccaagggaagatt
gcaaagctggaaactgtccccaaggaagacttggacctgccaaaccacttggtgggtctg
aagaggaactacatcaagctgtccttcaacacggtggatgacttggtaaaggtgcgtaag
gagatctctcctgctgtgaggaaaaacagagagcgagaccaggcgagcgatgtctacacg
gccatgctgtcaagcgctctgagcggaggcgtcctgaccatggatgaagacggagcctcc
agaaaggtggccaaccagatggacaacatcctggatatgcgggagtacgatgtaccctac
catgttcgcctgtccattgacctgaagatccatgtggctcactggtacaacgtgaggtac
cggggcagcacctacccccctgaaatcacctgccgagacgacctcgtggagcgcccggat
cctgtcgttcttgcctttgacattgaaactaccaaactccctctgaagtttcccgatgca
gaaacagaccagatcatgatgatctcctacatgattgatggacagggctacctcatcaca
aacagggagatcgtctctgaggatattgaagactttgagtttactcccaagccagagtat
gaggggcaattttgtgtctttaacgaaccagatgaagctcatttaatccagaggtggttt
gaacatatccaggagaccaaaccaaacatcattgtcacatacaatggagacttctttgac
tggccctttgtggaagcaagagcaacagttcatggaattaatatgtaccaggaaatcggg
tttcagaaggacagccagggagaatacaaagcatcccagtgcatccacatggactgtcta
aggtgggtgaagagggacagttacctcccagtgggaagtcacaacctgaaagcagcagct
aaagcaaaactgggttatgatccagtggagctggaccctgaagagatgtgccggatggct
acagaggagcctcagatcctggccacctattcagtgtctgatgcagttgctacctattac
atgtatatgaagtacgtgcatcctttcatttttgccttgtgcaccatcattcccatggag
ccggatgaggtgttaagaaaaggatctgggacactgtgtgaggcactgctgatggttcag
gcctatcatgccaacatcatcttccccaacaagcaggagcaggaattcaacaaacttaca
gaagatggccatgtgctggactcggagacatatgtgggaggccacgtggaagctctggag
tcgggggtcttccgcagtgacatcccctgccgcttcagaatgaatcctgctgcctttgac
ttcctggtgcagaatgtggagaagacgctgcggcatgccatcgaggatgaggagggtctg
ccactggatcaggtcaccaacttccaggaggtttgtgatgaaatcaaggtcaaactcaat
tccctgaaggatgttccaaacagaattgagtgtccccttatctaccatctagacgtgggg
gccatgtaccccaacatcattctgaccaacaggttgcagccctcagccatggtggatgag
gccacgtgtgctgcctgtgacttcaacaagccgggtgccaactgccagcgccggatgact
tggcagtggagaggagagttcatgcctgccagccgcagtgagtaccaccgcatccagcag
cagctggagtcggagaagttccctgctctggcccctgacgcagcaccccgcgccttccac
gaactctcccgggatgagcaggccaagtatgagaagaagaggttggcagattactgccgc
aaggcatacaagaagatccatgtcaccagggtggaggaacgagtcaccaccatctgccag
cgagagaactctttctatgtggacacggtgcgagctttcagggaccgccgctacgagttc
aaggggctgcacaaggtgtggaagaagaagctgtctgcagcagtggaggcaggagatgcc
tctgaagtgaagcgctgcaagaacatggaaatcctgtatgactccctgcagctggcccac
aagtgcatcctcaactctttctatggctatgtcatgcggaagggagctcgctggtactcc
atggaaatggctggcatcgtctgcttcacgggagcaaatatcatcacccaggccagggaa
ctgattgagcagattgggagacctctggaactggataccgatgggatttggtgcgtcctc
cccaacagcttcccagagaactttgtcatcaagtcaaccaatgccaagaaaccaaaggtg
acaatctcctacccaggtgccatgctgaacatcctggtgaaggaaggcttcacaaatgat
cagtaccaggagcttcaggacccggcctccctcacctacatcacgcgctcggagaacagc
atcttttttgaagtggatgggccatacctggccatgatcctccctgcgtccaaggaggag
ggcaagaagctgaagaaaaggtatgcagtgttcaatgaggatgggtccctggccgagctg
aaggggtttgaggtgaagcgccggggagaactgcagctggtgaagatattccagtcttca
gtgtttgaagcctttctgaagggcagcaccctagaggaggtctacgcttctgtggccaag
gtggcagattactggctggatgtgctctacagcaaggctgccaacatgcctgattcagag
ctgtttgagctgatctcggagaaccggtccatgtcacgcaagctggaggactacggggag
cagaagtctacatccatcagcactgccaagcgcctggcagagttcctgggtgaccagatg
gtgaaggatgcagggctgagctgccggttcatcatttccaagaaaccagaaggatctccg
gtgacagagagagccatccctctcgccatcttccaagctgagcccagcgtgcgcaaacac
tacctccgaaagtggctgaagagcccttcgctgcaggacttcaacatccgtgcgatcctg
gactgggactactacattgagagactgggaagcaccatccagaaaatcatcaccattccc
gcagccttgcagcaggtaaagaacccggtgccacgggtccggcacccagactggctccac
aagaaactcctggagaagaatgatgtgtacaaacagaaaaaaatcaacgagctcttcact
tcagaaggcaagagacaggtcctcaccaaccagccctcagaggggacgcccaactcacag
attggtgacatagaggattttggggctgccaagacccgtcagccagcagttcctattgca
aacaagcggaagcgagtccctgcagcagaggaaagccaacagatgtcccagtaccttgag
ctatcccagtcctggcgagagatcctgggtccaccaccactcttgggtaccaccaaggag
cagcgcctggtctggctgcgctaccaccagaagaagtgggagctgcaggcgcggcagcgg
cgggagcgacgcaagaggcggcggctggaggatggtggggaggcggcggctggaggaggc
gcccgccaggccctctccaaagggctgggcagttacctgcgccaggcagcgcgcagcatc
ctggacctgccctggcagatcgtgcagattgctgagaccagccagcctggactgttcagg
ctgtgggcagtgatcggaagcgacctgcactgcatcaggctgagcattccccgggtcttc
tatgtcaaccagcgtgtcccaaagccggaggagggagcagcctacaggaaggtgaacagg
atcctgccccgctcaaacttagtttacaacctgtatgaatactcagtccctgaagacatg
taccaagagcacatcaatgaaatcaatgcagacctctctgctccggacattgagggggtg
tatgagacacaggtgccgctgctcctccgcgccctgatgcaactgggctgtgtgtgcatg
gtcagcagacagcttgtcgggcacctggcagggcgagaggctgaaacctttgacattgag
cacctagagatgcgctcactggcccagttcacatacctggagccaggaagcattcgccac
atctacctctaccacagctcccagggtaacaaggcgctcttgggccttttcatcccctca
cagcgcaaagctgccgtctttgtgctggacagggtccgcagcaaccagatgccaaatctc
accaccctgttttcggcggagcgcagcgcactgctggagaaggtgggtgaagagctactg
ccaccagacaagcacaccttcgaagtgcgtgctgagaccgaccccaagaccatttacaga
gccatccagcggctgctgctgggttacaaggatgagcgccgaggccccacactggtggct
gtgcagtctaactgggacctgaagcggctggtgagcgggatccccatcattgaagagttc
cctttggtccccatccagctggtagatgacatcagctactcggtcctggactggcagcgc
cacgctgcccgccgcatgatccgccactacctcaacctggacatgtgcctctcccaggcg
ttcgagatgagcaggtactaccacatccccattgggaacctccccagtgacatctctacc
tttggctctgacctgttcctctcccgccacctccgtcgtcacaaccacttgctgtggctg
tcacccacagcccgcccagacctggggggtaaggaagctgatgacaaccgcctcgtcatg
gagtttgatgagagagcctctgtagagatcaacaaccctggttgctactccacagtgtgt
ctggagctggacatccagagcctggctgtaaacacggtgttgcagtcccaccacataaac
gacatggaaggaggctccagcatgagcatcagctttgatgtgattcagcaggcatcccta
gaagacatggtgacagggaaccaagctgccaacatcccagccagctacgatgaaactgcc
ctctgctccaacactttcaggatcctgaagagcatggtggtgagctgggtgaaggagatc
acgcagtatcacaacgtctacgcagacaaccaggtcattcacttctaccgctggctccgc
tctccttcctccctgctctatgacccagcactgcaccgcatgcttcacaacatgatgaag
aagcttttcctacagctggtggcagagttcaagcgtttgggctcctcagtggtttatgcc
aacttcaaccggatcattctgtgcaccaaaaagcggcgcatcgaggatgccatcagctac
atggagtacatcatcaacagcattcactccaaggagatcttccattctctgaccatctcc
ttttcccgctgctgggagttcctactctggatggatccagcaaattatggaggtatcaag
ggaaaagtggattctcgcatccactacggggagaaggttaccagcaagagtcaagtgttg
gaggaggaggaggacagcgaggaggaggaggaggtggcggtgggggaagaagaggaggaa
ggggagccaaatgtggaggagctgctggagaacagctggaacattgcgcagttcctgcct
caggccgcctcctgccagagttacttcctgatgattgtgtcagcctacattgtggccgtg
taccacagcatgaaggaggagctgcggcgcagtgcccctggaagcacccctgtcaagagg
aggagcaccagccaggtgtcccaggaggcgctggcagagatgggggccatgcctggcatg
atcaccttctcacaggattatgtggccaatgagctcacccagagcttcttcaccatcacc
cagaagatccagaagaagatggctagttctcgaaatgccactgagccttcggacatgttc
ccggtgctgcctggctcctacttgccactcaacaacccagctttggagttcatcaaatat
gtttgcaaggtcctctccctggatgccaacataaccaaccaggtgaacaaactgcgccgg
gacctgctgcgtctcattgaggtgggcgagttctcagaagctgcccagttccgggaccct
tgccgctcctacgtgctccctgaagtcatctgcaggaactgtaacttctgcagggacctg
gacctgtgcaaggaccctgccctctcccaggatgggtcagcagtgcccggttgggtctgc
tccaactgccaagtgcagtacgactccgatgccatcgaagcagcactggtggaagtcctg
cagaagaagctgatggcctttgtgctgcaggatctggtgtgcaagaagtgtcatggtgtg
aaggagagacacatgccagtgtactgcagctgtgctggagactttgccctcaccatctcc
tcccagacctttatggaccatgtcaaagtcttccagaacatcgcccggcactacagcatg
gcctatctgctggaaaccattgagtggctgctgtgcaccaatccccagctccagcaatga
DBGET
integrated database retrieval system
