Psittacula echo (Mauritius parakeet): 308227275
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Entry
308227275 CDS
T12082
Symbol
MED13
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
pech
Psittacula echo (Mauritius parakeet)
Brite
KEGG Orthology (KO) [BR:
pech00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pech03021
]
308227275 (MED13)
Transcription machinery [BR:
pech03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
308227275 (MED13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
308227275
NCBI-ProteinID:
XP_080485867
LinkDB
All DBs
Position
15:1516148..1571744
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AA seq
2179 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILSSFSRC
LKADVLSVWRRDQRPGRRELWIFWWGDDPNFADLIHHDLSEEEDGVWENGLSYECRTLLF
KAVHNLLERCLMNRNFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFLHGDSNVCTSVEI
SQHQPVYLLSEEHLTLAQQSNSPFQVILSPFGLNGTLTGQSFKLSDSSTKKLIGEWKQFY
PVTSNLKEGSEEKQEDMDWEDDSLAAVEVLVAGVRMVYPACFVLVPQTDIPAPSTVGASH
CSTTCLGVHQVPASTRDPAMSSVTLTPPTSPEEVQTVDAQSAQKWVKFSSVSDGFISDST
SHHGGKIPRKLANQVVDRVWQECNMNRAQNKRKYSATSNGLCDEETAEKIACWDFVEATQ
RTNCNCSRHKNLKPRNSGQQGQAPPVGQQQQAAPKHKTNEKQDKGDKPQKRPLTPFHHRV
SISDDVAMEADSASQRLVMTAPDSQVRFSNIRTNDVAKTPQMHNAEMANSPQPPPLSPHP
CDVVDEGVAKAPSTPQSQHFYQMPTPDPLVPTKTMEDRLDGLSQPFPAQFPEVIEPTMYV
GTAVNLEEDEADTTWKYYKVPKKKDGEFLPPQLPNDKLRDDPVIPAGQENLTSVTELMVQ
CRKPLKVSDELVQKYQSKNQYLAAVATEADQEPEIDPYAFVDGDVEFLFPDSKKDRQNIE
REAGKKHKAEDGTSGVTVLSHEGEDAMSLFSPSVKQDAQRIAAHARTASTSLFHETDLVV
SYTDLDNLFNSDEDELTPGSKRTVNGTDDKSNCKEAKAGNLDPLSCISTADLHKMYPTPP
SLEQHIMGFSPMNMNNKEYGSMDTTLGGTVLEGNSSSVGAQFRIEVDEGFCSPKPAEIKD
YSYVYKPENCQALVGCSMFAPLKTLPSQCLPPIKLPEECIYRQSWAVGKLDLLPPGPAMP
FIKDGDGSAMDQEYGPAYTPQTHTPFGMPPSSAPPSNSGAGILPSPSTPRFPTPRTPRTP
RTPRGAGGPASAQGSVKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLILS
ESVMNLFKDCNFDSCCICVCNMNIKGADVGVYIPDPTQEAQYRCTCGFSAVMNRKFGNSS
GLFLEDELDILGRNTECGKEAEKRFEALRATSIEHGSGGLKEPEKLPDELILLLQDQCTN
LFSPFGAADQDSIPKVGAVSSLVRVEERDCCNDCYLALEHGRQFMDNMSGGKVDEALVKT
TCLHHWSKRNVVDVSMQCSQDILRMLLSLQPVLQDAIQKKRTVRSWGVQGPLTWQQFHKM
AGRGSYGTDESPEPLPIPTFLLGYDYDFLVLSPFALPYWERLMLEPYGSQRDVAYVVVCP
ENEALLNGAKSFFRDLTAIYESCRLGQHRPICKLLPDGIMRVGPTASKKLSEKLVTEWFS
QTANANNEAFSKLKLYAQVCRYELGPYLASQPLDNSLLSQINLVPPSSQSASALPPVTAN
TGNPNTPSSAPAAPTSSTITVTSNSAMSSAATTANSTLTTTAPSSSSANLGSGISTSKPS
SFPPFSSMNNTTSASLPTQAATVQNGQTGGQQQQPTLQTAGMSGDATSAPAQPHPEVSES
TMDRDKVGVPTDGDSHAITYPPAIVVYIIDPFTYEKKDENSSSSSLWTLGLLRCFLEMVQ
VLPPNIKNIISVQIVPCQYLLQPVKHEDRQIYTQHLKSLAFSAFTQCRRPLPTSTNVKTL
TGFGPGLAMETALKSPDRPECIRLYTPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYC
LSHDQRWLLASCTDLYGEQLETCIINIDVPNRARRKKGSARRLGLQKLWEWCLGLVQMSS
LPWRVVIGRLGRIGHGELKDWSCLLSRRNLQSLSKRLKDMCRMCGISAADSPSILSACLV
AMEPQGSFIIMPDSVSTGSVFGRSTTLNMQTSQLNTPQDTSCTHILVFPTSASVQVASST
YTTENLDLAFNTNNDGADGMGIFDLLDTGDDLDPDIINILPASPTGSPVHSPGSHYPHGG
DMGKGQGTDRLLSTESHDEVTNILQQPLALGYFVSTAKAGPLPDWFWSACPQAQNQCPLF
LKASLHLHVPSVQSDELLHSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPATQDRRSC
LPIHFVVLNQLYNFILNML
NT seq
6540 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctgcttcgtgccgaacggggccagcctggaggattgccattccaacctcttc
tgcctggctgatctaactgggattaaatggaagcgatacgtatggcagggtccaacatct
gccccgattctctttccggtcacggaagaagaccctattttgagcagcttcagccgctgt
ctgaaagcggatgtactcagtgtttggcgccgagaccagagaccgggacgcagggagcta
tggatattttggtggggtgatgaccccaactttgctgaccttattcatcatgatctctca
gaagaggaagatggtgtttgggagaatggactttcttatgaatgtcgcactctgcttttc
aaagccgttcacaaccttttggagaggtgtctgatgaacaggaatttcgtacgcattggg
aagtggtttgtgaagccttacgagaaagatgaaaagcctataaacaaaagcgagcacttg
tcctgctcattcaccttcttcttacatggagatagcaacgtttgcaccagtgtggagatc
agtcagcatcaacctgtgtacctgctcagtgaagaacacctcactcttgcccagcagtca
aacagcccttttcaagttattctaagtccctttggattaaatggcacgctcacagggcag
tcattcaagctttctgattcatcgacaaaaaagcttattggtgaatggaaacaattctat
cctgtcacatccaacttgaaggagggatctgaggaaaaacaagaagacatggattgggag
gatgattctttagctgctgttgaagtccttgttgctggtgtgcgaatggtatacccagca
tgcttcgttctagttccccagacagacatccctgcccctagtactgtaggggcatcgcac
tgttcaactacttgcttgggtgtccaccaagtgcctgcttccacaagagatcctgccatg
tcttcagtaactctcactccaccaacgtctccagaggaagttcaaacagttgatgctcaa
tctgcccagaagtgggtgaagttctcttcagtttctgatggattcatctctgacagtacc
agccatcatggtggcaaaatacctagaaagctggccaaccaagtggtagacagagtttgg
caagaatgcaatatgaacagagcacagaacaagaggaagtattctgctacttcaaatggc
ttgtgtgatgaagagacagctgaaaagatagcatgctgggattttgttgaagccacgcag
aggacaaattgcaattgttcaaggcacaaaaatctcaaaccaagaaattcaggtcaacag
gggcaggcaccacctgtgggccaacaacagcaagcagctccaaagcacaagacaaatgag
aagcaagacaaaggggataagccacagaaacgccctttgactccttttcatcatcgtgta
tctatcagtgatgatgttgccatggaggcagattcagcgagtcagaggcttgtgatgact
gcaccagacagtcaagtgagattttcaaatatccgaactaatgatgtagcaaagactcct
cagatgcataacgctgaaatggcaaattcacctcagccaccaccacttagtcctcacccg
tgcgatgtagttgatgaaggggtagctaaagctccttctactcctcagagtcaacatttc
taccagatgccaacaccagaccccttggttcccacaaaaacaatggaagacagactcgat
ggcttgtctcagccttttccagctcaatttcctgaagttatagagcctacaatgtatgtt
ggtactgcagtgaatttggaggaagatgaagctgatactacttggaagtattataaagtt
ccaaagaaaaaggatggggaattcttaccacctcagcttcccaatgataagttgagagat
gatccagtaatacctgctggacaggaaaacctaacatcagttacagaattaatggtgcaa
tgtaggaaacctctgaaggtttcagatgaactggtgcaaaagtatcagagtaaaaaccaa
tacctagcagcagtagcgacggaagctgaccaggaacctgaaattgatccttatgccttt
gttgatggtgatgtggaattcttattccctgatagtaaaaaagataggcagaacattgag
agggaagctgggaagaaacacaaggctgaggatgggacatctggtgttacagttctgtcc
catgaaggagaggatgctatgtctctatttagtccttctgtcaagcaagatgcccaacgt
attgctgctcatgctcgcactgcatcaactagcctgttccatgaaacagacttggtggtc
tcttatactgaccttgacaatctcttcaattctgatgaagatgaactaacacctggatct
aaaagaacagtgaatggcactgacgacaaatccaactgcaaagaggcaaaagcaggaaat
ctagacccactgtcatgcataagcactgcagatctccataaaatgtatccaactccacct
tcactggaacaacatattatgggattttctccaatgaacatgaataataaggaatatggc
agtatggacactacacttggaggaacagtacttgaagggaatagctcgagtgtgggagcg
cagttcagaattgaagtagatgagggtttttgcagccccaaacctgctgaaataaaggat
tattcttatgtttataaacccgagaattgtcaagctttagtgggatgttccatgtttgca
ccactgaagacgcttcccagccagtgtcttcctcccatcaaactgccagaagaatgcatt
tatcgccagagttgggctgtgggaaagttggatttacttcctccaggacctgccatgcca
ttcatcaaagatggtgatggaagcgctatggatcaagagtatggccctgcatacacgccg
caaactcatactccatttgggatgccaccaagtagcgcacctcccagtaacagtggagct
ggaattctcccttctccttctacccctcgtttcccaactcctagaacaccaaggactcct
cgaaccccccgtggggctggtggacctgcaagtgcacagggttcagtcaaatatgagaac
tctgatttatactcaccagcttccacgccatcaacatgtagacctcttaattctgttgaa
cctgcaactgtgccttccattccagaggcacacagtctttatgtgaatctcatcctctca
gagtctgtaatgaatctcttcaaagactgtaactttgacagctgctgcatatgtgtttgc
aatatgaacatcaaaggtgctgatgttggagtttacattcctgatccaacacaagaggcc
cagtataggtgtacctgtggtttcagtgctgttatgaatagaaaattcggcaacagttct
ggattgtttcttgaagatgaattggatattctaggacgtaatacagagtgcggcaaagaa
gcagaaaaacgctttgaagctctcagagctacttctattgaacacggcagtggaggactg
aaagaacctgagaaactgcctgatgagttaatactgctgctgcaggatcagtgcaccaac
ttgttctcaccgtttggagcagcagatcaagattccattcccaaagttggtgcagttagc
agcctggtacgtgtagaagaaagggattgttgcaatgactgctacttagccttggaacat
ggacggcagttcatggacaatatgtcaggagggaaagttgatgaagcacttgtgaaaact
acttgcttgcaccactggtcaaaaagaaacgttgtggatgtgagcatgcagtgttcccag
gacatcctccgcatgctcctctcgctccagcccgtccttcaggatgcaattcagaagaag
cggacggtccggtcctggggtgtgcaggggcccctgacgtggcagcagttccacaagatg
gctggcagaggctcttatggaactgatgagtccccggaaccactgccaatcccaacattc
ttgttgggatacgattatgattttctggtgctgtctccatttgcattgccgtattgggag
aggctgatgttggaaccttatggatctcaaagagatgttgcttatgttgtggtgtgccct
gagaacgaggctctgctaaatggagcaaaaagcttctttagggatctgactgcaatatat
gagtcatgcaggcttggtcagcacagacctatctgtaagttattgcctgatgggatcatg
agagttggtcctactgcttcaaagaaactttctgagaagctggtcacagagtggttctca
cagacagctaatgccaacaacgaagcgttttccaaactcaaactatatgctcaagtttgc
agatacgagctgggtccttatctcgcttctcagcctttggacaattctttactttcccaa
ataaatctggtccctccctccagccagtcggcctctgctctgcccccagtgacagctaac
actggaaatcctaacactccgtcatctgctcctgcagctcccaccagtagtactattaca
gtgacatcaaacagtgccatgtcttctgcagctacgacagctaattcgacattgactacc
actgccccatcatcctcttctgccaacttaggcagtgggatctcaacaagcaagccttct
tcatttccaccttttagcagtatgaacaataccacttctgcctccctgcccactcaggct
gcaacagtccaaaatgggcaaacaggaggacagcagcaacagccaacactgcaaacagct
gggatgtctggagatgctacttcagcgcctgcacagccccatccagaagtttctgaaagc
actatggatcgtgataaagttggagtccctacagatggagattcacatgctatcacctat
ccacctgcaattgtagtttacattatcgatccttttacatatgaaaaaaaggatgagaac
agcagctcatccagtttgtggacacttggacttctgcgctgcttcttagagatggttcag
gttcttcctcctaacatcaagaatataatttctgtgcagattgtgccgtgtcagtacctt
ctccaacctgtgaaacatgaggaccggcagatttacactcagcatttaaaatctctggca
ttttcagcttttactcagtgtcggagacctcttccaacttccaccaatgtgaaaacgtta
actggctttgggccaggtttagccatggaaacggctcttaagagccctgatagacctgag
tgtattcgactatacacccctccttttatactggctccagtaaaggacaagcaaacagaa
ctaggagaaacttttggggaagctggccagaagtataacgtgctttttgtaggctactgt
ttgtctcacgatcaacgatggcttcttgcatcttgtacagatctctatggagaacagtta
gaaacttgcataattaatattgatgtaccaaacagagctcgcaggaaaaagggttctgct
cgcagacttggtcttcagaaactctgggaatggtgcttgggacttgtgcagatgagctct
ttgccatggagagttgtaataggccgcctgggaagaatagggcatggggaattaaaagac
tggagttgtttgctgagtcgccgaaaccttcagtcccttagcaagagactaaaagacatg
tgcagaatgtgtggtatctctgctgcggactcccccagcattctcagtgcttgtttggtg
gcaatggaaccacaggggtccttcattattatgccagattctgtatcgaccggctctgta
tttggacgtagcaccactttaaacatgcagacatctcagctgaacaccccacaggacaca
tcatgcactcatatacttgtgtttcccacgtctgcatctgtgcaagtagcatcgtcaact
tacaccactgaaaacttggatctggcctttaacacaaacaatgatggagcagatggaatg
ggaatctttgacttgttagacactggagatgatcttgatcctgatattataaatattctt
cctgcatcccctactggatcccctgtacattctccagggtcccactacccccatggaggt
gatatgggcaagggtcaaggtacagatcgattgctttcaacagaatctcatgatgaagta
acaaatatactgcaacagccattggcccttggctattttgtgtcaactgccaaagcaggt
ccgttgcctgactggttttggtcagcgtgccctcaagcacaaaatcagtgtcccctgttt
cttaaggcctctttgcacctccacgtgccttcagtgcaatcagacgagctactccacagt
aaacactcccatccacttgattctaatcaaacttctgatgtgctcaggtttgttctggaa
cagtacaatgcactctcctggctaacctgtgatcctgcaacccaggacagacgatcatgt
ctcccaattcattttgtggtgctgaatcagttgtataattttatcctgaatatgctgtga
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