Psittacula echo (Mauritius parakeet): 308227329
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Entry
308227329 CDS
T12082
Symbol
PDS5A
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A isoform 1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
pech Psittacula echo (Mauritius parakeet)
Pathway
pech04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pech00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
308227329 (PDS5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pech03036
]
308227329 (PDS5A)
03400 DNA repair and recombination proteins [BR:
pech03400
]
308227329 (PDS5A)
Chromosome and associated proteins [BR:
pech03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
308227329 (PDS5A)
DNA repair and recombination proteins [BR:
pech03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
308227329 (PDS5A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
Cnd1
EnP1_C
PI-TkoII_IV
Motif
Other DBs
NCBI-GeneID:
308227329
NCBI-ProteinID:
XP_080485978
LinkDB
All DBs
Position
1:complement(25526720..25607487)
Genome browser
AA seq
1356 aa
AA seq
DB search
MLHLPELHERPVEDCGEGKFITSSTRMDFPATQPKPAADGKIIYYPPGVKEITDKITNDE
VVKRLKMVVKTFMDMDQDSEDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADIFRI
YAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDC
NEIFIQLFRTLFSVINNSHNQKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAHKNL
NKQAFDLAKVLLKRTVQTIEPCIANFFNQVLVLGKSSVSDLSEHVFDLIQELFAIDPHLL
LSVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLATQNRPLWQCFLGRFNDIHVPVR
LESVKFASHCLMNHPDLAKDLTEYLKVRSHDPEEAIRHDVIVTIITAGKRDLSLVNDQLL
GFVRERTLDKRWRVRKEAMMGLAQLYKKYCLHAEAGKDAAEKVSWIKDKLLHIYYQNSID
DKLLVEKIFAQYLVPHNLETEERMKCLYYLYASLDPNAVKALNEMWKCQNMLRSHVRELL
DLHKQPTSEANSAAMFGKLMTIAKNLPDPGKAQDFVKKFNQVLGDDEKLRSQLELLISPT
CSCKQADVCVREIARKLANPKQPTNPFLEMVKFLLERIAPVHIDSEAISALVKLMNKSIE
GTADDEEEGVSPDTAIRAGLELLKVLSFTHPTSFHSAETYESLLQCLRMEDDKVAEAAIQ
IFRNTGHKIETDLPQIRSTLIPILHQKAKRGTPHQAKQAVHCIHAIFSNKEVQLAQIFEP
LSRSLNADVPEQLITPLVSLGHISMLAPDQFASPMKSVVANFIVKDLLMNDRSTGEKNGK
LWSPDEEVSPEVLAKVQAIKLLVRWLLGMKNNQSKSANSTLRLLSAMLVSEGDLTEQKRI
SKSDMSRLRLAAGSAIMKLAQEPCYHEIITPEQFQLCALVINDECYQVRQIFAQKLHKAL
VKLLLPLEYMAIFALCAKDPVKERRAHARQCLLKNISIRREYIKQNPMANEKLLSLLPEY
VVPYMIHLLAHDPDFTKPQDVDQLRDVKECLWFMLEVLMTKNENNSHAFMKKMAESIKLT
RDAQSPDEPKANEKLYTVCDVALCVINSKSALCNADSPKDPVLPTKFFTQPEKDFCNDRN
YISEETRVLLLTGKPKPTGVLGTVNKPLSATGRRPYIRTTGSETGSNISVNSELSSSAGN
RSREQSSDISETGVSENDENPVRIISVTPAKTEPVKNKEINSDQATQGNSTERGKKRTAT
ASGTENIHQKPEEKNVDETGPSLAAKTRRGRPPKPEPQGTTAKNEETNKPPVRGRKRAAV
SQESPGSLEAGNAKAPKQQDTAKKPASAQRQIDLQR
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaccttccggagctgcatgagaggccggtagaggactgtggagaaggaaagttt
ataaccagcagcaccaggatggacttccctgctacccaaccaaaacctgctgccgatggt
aaaatcatctactatcctcctggagtgaaggagattacggacaaaattaccaacgatgag
gtggttaaacggttaaagatggtggtaaaaaccttcatggatatggaccaggactcggag
gatgagaagcagcagtatctcccattagccttgcaccttgcatctgaattcttcctcagg
aatcccaataaagatgtgcgcctccttgtagcgtgttgcttggctgatatctttcgtatc
tatgctcctgaagctccatatacttcccatgacaaacttaaggatattttcttgtttatt
acaagacaattaaaaggcttggaggacacgaagagccctcagtttaacagatacttttac
ttgttagagaatttagcgtgggttaaatcttacaacatctgctttgagttagaagattgc
aatgaaatttttattcagctttttaggactcttttttcagttataaataatagccacaac
cagaaggtacaaatgcatatgctggatttgatgagttctatcatcatggaaggcgatgga
gtaactcaggagctgctggactcgattttgataaacctcattcctgcacacaagaacctt
aataaacaagcatttgatcttgcaaaagtcctgttgaaaaggacagtccagaccattgaa
ccgtgtattgccaatttttttaaccaggttctggtactgggaaagtcttcagtaagtgac
ttatcagaacatgtgttcgacttgatacaagagctttttgccatagatcctcacttactg
ctgtctgtcatgccacagcttgaattcaagctgaagagcaatgatggagaagaacgcttg
gctgttgttcgacttctggctaaactctttggctccaaagattctgatctggccacacag
aaccgtcctctttggcagtgctttcttgggcggttcaatgatatccatgtccctgtgaga
ttagagagtgtgaaattcgccagtcattgtttaatgaaccatccagacttagcaaaagac
ctcactgaatatttgaaggttagatcacatgacccagaagaagccattcgacatgatgtt
attgttacaattattactgcgggcaagagagatctttctttagtcaatgaccagctgctt
ggctttgtaagggaaagaacactagacaaacggtggcgagtaagaaaagaagctatgatg
gggcttgcccagctatacaagaagtattgtcttcatgcagaggctggaaaagatgctgca
gagaaagtgagctggataaaggataaacttttgcacatatattatcaaaatagcattgat
gacaaattattagtagaaaaaatctttgctcaatatctcgttccacacaatttggaaaca
gaagagcgaatgaagtgcttgtactatttgtatgctagcttggatccaaatgctgtcaaa
gcactgaatgagatgtggaagtgccagaacatgctaaggagtcacgtacgagaattacta
gacttgcataagcaacccacttcagaagcaaacagtgctgccatgtttggaaagctgatg
accatagcaaaaaaccttccagatcctggaaaagcacaagattttgtgaagaaattcaat
caagttctgggagacgatgagaaacttcggtcccagcttgagctgttaattagccctacg
tgttcttgtaaacaggcagatgtctgtgtgagagagatagcccggaaacttgcaaatcct
aagcagccaacaaatccttttctggaaatggtcaaatttctcttggaaagaattgcccct
gtacatattgactcagaagccattagtgcactagtaaaactaatgaataaatccatagag
gggacagctgatgatgaagaggagggtgtaagtcctgatactgctattcgtgcaggactt
gaacttctcaaggttctgtcctttacacatcctacctcgttccactctgcagagacctat
gagtctctgcttcagtgcctcaggatggaagatgataaggtagctgaggcagccatacag
attttcagaaacacgggtcacaaaatagaaacagacttgccacagataagatcaacacta
attcccattttgcatcagaaagcaaaaagaggcactcctcatcaggcaaaacaagctgtt
cactgtatacatgccatattttcgaataaagaagtgcagcttgcacagatctttgagcca
cttagtagaagtttgaatgctgatgtaccagaacaacttataactccattagtctcattg
ggtcatatttctatgttggctccagaccagtttgcttctccaatgaaatctgttgttgca
aacttcattgtgaaagatcttctaatgaatgacaggtcaacaggtgagaaaaatggaaaa
ttgtggtctccagatgaagaagtttctccagaagtactagcaaaggtgcaagcaattaaa
cttttggtacgctggctgttgggcatgaaaaacaaccagtcaaaatctgcaaattccacg
ctccggttattatcagctatgctagtcagcgagggagacttgacagaacagaagcggatc
agtaaatcagatatgtctcgactgcggttagctgctggtagtgcaataatgaagcttgca
caggaaccctgttaccatgaaataattactccagaacagttccagctctgtgcacttgtc
attaatgatgagtgctaccaagtgaggcagatatttgcccagaaactgcataaggcgctt
gtgaaattactgctccctttggaatatatggcaatcttcgctttgtgtgccaaagaccct
gtgaaggagagaagagcacatgccagacagtgcttgctcaaaaacatcagtatacgaaga
gaatatattaagcagaatcctatggctaatgaaaaattgctatccttgctgcctgaatat
gtggtaccatacatgattcacttactggcacatgatccagatttcacaaaacctcaggat
gttgatcagcttcgtgatgtcaaagagtgcctgtggtttatgcttgaagttttaatgaca
aagaatgagaacaatagccatgccttcatgaaaaagatggcagaaagcatcaagcttacc
cgagatgctcagtctcctgatgagccaaaggcaaatgaaaaactttatacagtgtgtgat
gtagcactatgtgtcatcaacagcaaaagtgctttgtgcaatgcagattcaccgaaggac
cctgtattgccaaccaaattttttacgcaacctgagaaggatttttgcaatgacaggaat
tatatttcagaagagacaagggttcttcttttgacaggaaagccaaaaccaactggtgta
ttaggtacagtaaacaaaccattgtctgcaactggaaggaggccgtacatcagaactaca
ggatcagagactggaagcaatatcagtgtaaactctgagctgagctcttctgcaggaaac
agatcaagggaacaaagttcagatatatcagaaactggggtcagtgaaaatgatgaaaat
cctgtgaggattatttcagttacaccagcaaagacggaacctgtgaaaaataaggagatt
aattctgatcaggctacacaagggaacagcactgaacgtgggaaaaaaagaacagcaaca
gcatctggaactgagaatattcatcaaaaaccagaagaaaaaaatgtagatgaaacagga
ccatcactcgcagcaaaaaccaggagagggcgtccacccaaacctgaacctcagggcacc
actgcaaaaaatgaggaaacaaacaaaccacctgtccggggaaggaaaagggcagcagtc
agtcaagaaagtccaggaagtttagaggcaggtaatgccaaagcaccaaaacagcaagac
acagcaaaaaagccagcatcagcacagagacaaattgatctacaaaggtaa
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