Psittacula echo (Mauritius parakeet): 308228094
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Entry
308228094 CDS
T12082
Symbol
LOC308228094
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pech Psittacula echo (Mauritius parakeet)
Pathway
pech03013
Nucleocytoplasmic transport
pech03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pech00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
308228094 (LOC308228094)
03015 mRNA surveillance pathway
308228094 (LOC308228094)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pech03019
]
308228094 (LOC308228094)
Enzymes [BR:
pech01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
308228094 (LOC308228094)
Messenger RNA biogenesis [BR:
pech03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
308228094 (LOC308228094)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
308228094
NCBI-ProteinID:
XP_080487328
LinkDB
All DBs
Position
17:complement(8796242..8808622)
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AA seq
479 aa
AA seq
DB search
MATDSWALAVDEQEAAAESLSSLHLKEEKSKPDANGAVVKADDNIEKTEDEEKEDRAAQS
LLNKLIRSNLVDTTNQVEVLQRDPTSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
NALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPGNKYPQCLCLSPTYELALQTGK
VIEQMGKFYPELKLAHAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPRDCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKRE
EETLDTIKQYYVLCSNRDEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAAELSKEGHQV
ALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAINMVDSKHSMNILNRIQEHFNKKISKLDTDDLDEIEKITN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcctgggccctggctgtggacgagcaggaggcggcggccgagtcgttg
agcagtttacacctgaaggaggaaaaatccaaaccagatgccaatggtgctgttgtcaag
gcagatgacaacattgagaagacagaggatgaggagaaggaggacagagctgcccagtcc
ttgctgaacaagctgatccgcagcaacctggttgacaccacaaaccaggtggaggtgctg
cagagggaccccacatcccctctctactccgtgaagtcttttgaggagctgcgactgaaa
ccacagctcctgcaaggagtctatgccatgggcttcaacagaccatctaagatacaggag
aatgcgctgcccatgatgcttgctgagcccccacagaacctgattgcacagtctcagtcc
ggcactggcaagacggctgcctttgtcctggccatgctcagtcgtgtggagcctgggaac
aagtatccacagtgtttgtgcctttccccaacgtacgagctggcactgcagacaggaaaa
gtgattgagcagatggggaagttttatccagagctgaaacttgcccatgctgtccgaggc
aataagttggagagaggtcagaagatctcagagcagattgtgatcggcactcccggcacc
gtgctggactggtgttccaagctcaaattcatagatcccaagaaaatcaaagtgtttgtg
ttggatgaggctgatgtgatgatagcaacccagggccatcaggaccagagcatccgcatt
cagagaatgctccccagggactgccagatgctgctgttctcagccacctttgaggattct
gtatggaaatttgctcagaaagttgttcctgacccaaacatcatcaaactgaagcgagag
gaggagactctggacactattaagcagtactatgttctgtgcagtaacagagatgagaag
ttccaggctctctgtaacatctatggcgctatcaccattgcccaggccatgatcttctgc
catactcggaagacagctgggtggctggcggcagagctttccaaggaaggccatcaggtg
gcactgctcagtggggagatgatggtggagcagagagccgcggtcatagagcgcttccga
gagggcaaagagaaggtgctggtgaccacgaacgtctgtgccagagggatcgatgtggag
caggtctctgttgttatcaattttgaccttcctgtggataaagatggaaatccagacaat
gagacatatctgcaccggatcggacgtacgggtcgctttgggaagcgaggactggctatt
aacatggtagacagcaagcacagcatgaacattctcaacagaatccaggagcattttaac
aaaaagattagcaaattggatactgacgacttggatgagattgagaagatcactaactga
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