Psittacula echo (Mauritius parakeet): 308228185
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Entry
308228185 CDS
T12082
Symbol
PRDM16
Name
(RefSeq) histone-lysine N-methyltransferase PRDM16 isoform 1
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
pech
Psittacula echo (Mauritius parakeet)
Pathway
pech00310
Lysine degradation
pech01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pech00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
308228185 (PRDM16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pech03000
]
308228185 (PRDM16)
03036 Chromosome and associated proteins [BR:
pech03036
]
308228185 (PRDM16)
Enzymes [BR:
pech01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
308228185 (PRDM16)
Transcription factors [BR:
pech03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
308228185 (PRDM16)
Chromosome and associated proteins [BR:
pech03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
308228185 (PRDM16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
PRDM2_PR
zf-C2H2_jaz
SET
zf-C2H2_6
zf-C2H2_11
zf-met
zf-H2C2_5
Zap1_zf1
zf-BED
DUF7128
C2CH-4th_BIRD-IDD
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
308228185
NCBI-ProteinID:
XP_080487480
LinkDB
All DBs
Position
17:<1268541..>1527893
Genome browser
AA seq
1266 aa
AA seq
DB search
MRSKARARKLPKSDSEIVNNMYETDPDLLAGESAEEETEDSIMSPIPVGPPSPFPTSEDF
TPKEGSPYEAPVYIPDDIPIPPDFELRESSIPGAGLGIWAKKKIEVGERFGPYVAVQRNT
LKETNFGWEQMLTDPEVTSQEGNIKKVADDLGNEKFCVDASPSAAGNWLKYIRGACSCEE
QNLAVCHLNDQIYYKVIKEIEPGEELLVYLKEGGYSLGNMAPSMEEEHSFRCEDCDELFQ
SKLDLRRHKKYACSAVSSLYESLSDEIKQEGLGDGQVYECKDCERMFPNKYSLEQHMVIH
TEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECENCVKVFTDPSNLQRHIRSQHVGA
RAHACPDCGKTFATSSGLKQHKHIHSTVKPFICEVCHKSYTQFSNLCRHKRMHADCRTQI
KCKDCGQMFSTTSSLNKHRRFCEGKNHYNPGGIFAPGLPLTPTSMMDKSKPSPNLNHASL
GFNDYFPSRPHPGGLPFSPAPPAFPALTPGFPGIFPPSLYPRPPLLPPTQLLKSPLNHTP
DAKLPSPLGNPALPLISAVSNSNQAASGEEKCESSLENSYLEKLKARNSDMSDGSDFEDV
NTTTGTDLDTTTGTGSDLDSDAESDRDKMKDKSKQMESKPDFVSSSVSASSTNNTSEIPL
FYSQHSFFPPPEEHLLPTTGAANDSIKAIASIAEKYFGPGFMGMQEKKMGSLPYHSMFPF
QFLPNFPHSLYPFTERTLNHNLLVKAEPKSPRDLHKVGSTSSESPFDLTTKPKEIKPILP
PPKVLPAPSSGEEQPLDLSIGNRIRASQNGGREPRKNHIYGERKLMASEVLPKISQSQLP
QQPSLHYAKPSPFFMDPIYSRVEKRKVTDPVGALKEKYLRPSPLLFHPQMSAIETMTEKL
ESFAAMKADTGTSLQPLPHHPFNFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTR
HLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLK
KHEHENVPVSQHSGVITNHLGTSASSPNSESDNHALLDEKEDSYFSEIRNFIANSEMNQA
SALADKRPEIQDIDGNSQCHGLANEKTEDVDDEDEELEEEDDDSLTGKSQDETVSPTAEP
RGAFEDEEDEEPTSLTMSFDHTRRCIEEDEAGLLDLEQMPNFGKGLDLRKAAEEAFEVKD
VFNSTLDSETIKQTLYRQAKNQAYAMMLSLSENAPLHASSQNSLGAWLDMAGAASESGTF
NPINHL
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgagatccaaggcgagggcgagaaaactgcccaaaagtgacagcgagattgtaaataat
atgtacgagaccgaccctgatctccttgctggcgaaagcgcagaggaggaaacagaggac
agtattatgtcccccattcctgtcggacctccatcaccctttcccaccagtgaggacttc
actcccaaggagggctcaccttatgaagctcccgtctacattcctgatgacattccaatc
ccaccagattttgaactcagagaatcttcgattccaggggcagggctagggatttgggcc
aaaaagaagattgaagttggggaaagatttggaccctatgtggcagtacagaggaacaca
ttaaaggaaacaaactttggatgggagcaaatgctgactgatcccgaggtgacctcccag
gagggcaacataaaaaaggttgccgatgacctgggcaatgagaagttctgtgttgatgct
agcccgagtgcagctgggaactggctgaagtacatccgcggggcctgctcctgtgaggag
cagaatctggccgtgtgtcacctcaatgaccagatctattataaagttattaaagaaatt
gagccaggagaagagctcttggtgtatttgaaggaaggtggttattcacttgggaacatg
gcgcccagcatggaagaagagcactcgttccgctgcgaggactgcgatgaactgttccag
tccaagctcgacctgcggcgccacaagaagtacgcttgcagcgctgtcagctccctctac
gagagcctgagtgacgagatcaagcaggaaggtcttggcgatggacaggtctatgagtgc
aaagactgcgagaggatgttccccaataaatacagcctggagcagcacatggtaatccac
accgaggagagggagtacaagtgtgaccagtgtcccaaggctttcaactggaaatccaac
ctgattcggcaccaaatgtctcacgacagtgggaaacggtttgaatgtgaaaactgtgtt
aaggtattcaccgaccccagcaacctccagcggcacatccgctcccagcacgtgggcgcg
cgggctcacgcctgcccggactgcggcaagaccttcgccacctcgtctggcctcaaacag
cacaagcacattcacagcactgtcaaacctttcatatgtgaggtctgtcacaaatcctac
acgcagttctccaacctgtgccggcacaagcggatgcacgcggactgtcgcacccagatc
aagtgcaaggactgcggccagatgttcagcactacctcctccctcaacaagcaccggcgc
ttctgcgagggcaagaaccattacaaccctgggggcatttttgcccctggcctgcccctc
acacccacttccatgatggacaaatccaagccctctcccaacctcaatcatgccagcctg
gggtttaatgattattttccatcccgcccgcacccggggggtcttccattctcacctgcc
cccccagcattccctgccctcacgccgggattcccagggattttcccaccctctctgtac
cccaggccccccttgttaccacccacacaactgctcaaaagtcccctcaaccacactccg
gacgcaaagctcccgagccccctcgggaacccagcccttcctctgatctccgcagtgagc
aacagcaaccaggccgcttccggagaggagaaatgtgaaagcagcctggaaaactcctac
ctggagaagctaaaagccaggaacagtgacatgtctgacggcagtgactttgaggatgtc
aacaccaccacaggcacagatctggacaccactactggcacgggttctgacctggacagt
gacgcagagagtgacagggacaaaatgaaagataagagcaaacagatggagagcaagcca
gattttgtgagcagctctgtgtctgcaagttccaccaacaacacaagtgagatccctctc
ttctattctcagcattccttctttcctccccctgaagagcacttgctgcctaccacgggg
gcagccaatgactctattaaagctatcgcctccatcgcagagaagtattttgggcctggc
tttatggggatgcaggagaaaaagatgggttcgctcccgtatcattccatgttccctttt
cagttcctccccaacttcccccattcactctatcctttcacggagcggaccctcaatcac
aacttgctggtcaaggcagaaccaaagtcacccagggacctccacaaagtcggcagcacc
agctcagagtcaccctttgatctcaccacaaagccaaaagagattaagccaatcttgccg
ccaccgaaggtcctgccagccccgtcctcaggggaggagcagccgctggatctgagcatc
ggcaaccgcatccgagccagtcagaacggaggcagagagccgcggaaaaaccacatctat
ggggagaggaagctaatggcaagtgaagtcttacccaagatttcccagtctcaactgcct
cagcagccatccctgcattacgctaagccatcaccctttttcatggaccccatatacagc
agggtggagaagcggaaggtgacagaccctgtgggtgccctcaaggagaagtacctgcga
ccctccccgctgctttttcacccccagatgtcagccatagaaacaatgacagagaaactg
gagagttttgcagccatgaaggcagacactggcacctccctgcagccccttccacatcac
cccttcaacttccgatctccacctcccacgttatcggatcccatcctgcgcaagggcaag
gagcgttacacctgcaggtactgcgggaagatcttcccacgctcggcaaatctgaccagg
catctgcggacacacactggagagcagccctacaggtgtaaatactgtgacaggtcattc
agcatttcctccaacctccagcggcacgttcgaaacatccataacaaggagaagccattc
aaatgtcacctgtgtaaccgatgctttgggcagcagaccaacctggaccggcatcttaag
aaacacgagcacgagaacgttccagtgagccagcactccggagtcattacaaaccacctt
gggaccagtgcctcttccccaaactcggaatcagacaaccatgcacttttagatgaaaaa
gaggattcgtatttctctgaaatcagaaattttattgcaaatagtgagatgaaccaagcg
tcagctttagcagataaaaggccagaaatccaggatattgatggcaattcccagtgtcat
ggattagcaaatgagaaaacagaagatgtggacgatgaagatgaagaactggaagaggaa
gatgatgacagcctgacagggaagtcccaggatgaaacggtatcacccaccgcagagccc
cgaggagcatttgaggatgaagaggatgaagagcccacatctctcaccatgagctttgac
cacacccgaaggtgtattgaggaggacgaagccggcctgttagatttggagcagatgccg
aattttgggaaggggctggatcttcgcaaagcagccgaggaagcatttgaagttaaagat
gtgtttaattccaccttagactctgagacaataaaacagactctgtacaggcaggctaaa
aaccaggcttatgcaatgatgctgtccctgtctgagaacgctcccctccacgcgtcctcc
cagaactcgctgggtgcttggttggacatggcaggagcagcttcagagtcggggaccttc
aaccccatcaaccacctctga
DBGET
integrated database retrieval system
