Psittacula echo (Mauritius parakeet): 308228296
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Entry
308228296 CDS
T12082
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform 1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
pech Psittacula echo (Mauritius parakeet)
Pathway
pech04270
Vascular smooth muscle contraction
pech04625
C-type lectin receptor signaling pathway
pech04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pech00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
308228296 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
308228296 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
308228296 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pech04131
]
308228296 (ARHGEF12)
Membrane trafficking [BR:
pech04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
308228296 (ARHGEF12)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
AAA_23
Motif
Other DBs
NCBI-GeneID:
308228296
NCBI-ProteinID:
XP_080487703
LinkDB
All DBs
Position
18:2621330..2692886
Genome browser
AA seq
1563 aa
AA seq
DB search
MSGTQSTITDRFPLKKPTRHGSILSRESPADKKQKVERCSSTHDFDPTDSSSKKTKSSSE
ESRSETYGLVQRCVVIQRDENGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNG
TLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSEVDLAAFGHMSPIMTSPHSP
VASGNAERITSPVLVGEENNIVHNQKVEILRKMLQKEQERLQSLQEEYNRSPATRLFKEI
QEAKKHIPQLQEQLSKATGCTQDGVLSSRSVTDSLQINEVEAESGDCVSKLDYSGDSPSR
PNSDITDSPRSGLKERVYPDESPEKTEVQDTDSQSSVGSPLSRVVPQIIGAEDDDFDTEQ
EQINGQCSCFQNIELLKSRPAHLAVLLHHVVSQFDPAALLCYLYTDLYKQTNSKETRRVF
LEFYQFFLDRAANLKVPVPDEISLELDRRRPELLPEELHRQFIQTMQDKVCPEVQRNLED
FRQKRSMGLTLAEGELTKLDAERVRDRIAMEKERACAEQIIAKIEEVLMTSQPLEEDKSS
TMQYVILTYMKHLGVKVKEPRNLEQKRGRIGFLPKIKVQSIKKEKEGEEKGKRRGFPNIL
GPPRRPSRHDSSAIGRAMEMQKPRHLKHVPPASSVSPEPPDSSKMRQSGSSSEGTDGPYP
PANPMSPLAMGPFSSPEGSKDSETGLKQTGEAPPAIDCMEGTPRTPNNTFEFPSPLENLQ
EEEGESERMVDMGTPKPFRKMDSVGFADVQSEDELYDFDMDMDPPNWQQLVSREVLMGLK
PYEIKRQEVINELFYTERAHVRTLKVLHNVFYQRVTREGILNSNDKRKIFSNLEDILGLH
VALNDQMKAVRKRNETSVIGQIGEDLLSWFSGPAEEKLKHATATFCSNQPFALEVIKSRQ
KKDSRFQTFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDNIAKYTELPEEKEKVKK
AADHCRQILNHVNQAVKEAENKQHLEDYQRRLDLSPLKQSEDPMMDEFRNLDLTKRKMLH
EGPLTWKVNRDKTIDLYTLLLEDILVLLQKQDDKLVLKCHSKILASTADSKHTFSPIIKL
NTVLVRQVATDNKAFFVISMSENGAHIYELVAQTVSEKNVWQDLIAQMAGTVKMGNTRRV
IPLPQSGPGEEEREEEEQQKLKEQHDIPASSLQSPDKDLGLESPLILNAQSSSLIMSEKS
KVESLLASEGQFDKVQQADLTLKDSSACYEHTTTSLSSVSEGQWALDALRNLGLLKQLLV
QQLGFSEKGTLEDRQRFPRFRTVSQEAQTEGGNEPGLQHPENSKFHQPGTDRALPRTGTN
ESTASYGLRTSAESPASGDAMQLIERDPRSSSNLAIDRMSMNLEISAAELEGVGADESGE
HFFDAREAHSDENPSESELMERKEEEDVQIRISGNYLILDGYGTVQESSTDEEVSSLVLQ
CTAGGRASLDSAQQQPLSPRDTQSDGGSSPFAEEMMASRWGAVEESCSFVASPHFSIESR
VQMLQYIQKIEDDLEKLKEVEEDYTILRRQGLAGSASTGEHSGFTYFRSSHRAETMLTAG
KVG
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtccacaatcacggacaggtttcctctcaaaaaacctacaagacac
ggcagcattctgagcagagagtctccagctgacaagaagcagaaggtggaacgctgcagt
agtacacacgactttgatccgacagatagctcctccaagaagacaaagtctagttcggag
gagagtagatccgagacgtatggtcttgttcaacggtgtgttgttatccaacgggatgaa
aacggttttgggctgacagtcagtggagacaatccagtcttcgtgcagtccgtcaaagaa
gatggagcagccatgcgggctggagtgcaaacaggtgatagaattatcaaggtgaatggc
actcttgtaacacactcaaaccatttggaggtggtaaagctgatcaagtcggggtcctat
gtagctctcactgttcaggggcgcccaccagggtcgcctcagattccattagctgattct
gaagtggatctggcagcgtttggtcatatgtctcccatcatgacatctccccattcacct
gttgcatcaggaaatgcggaaaggattactagcccagtgcttgtgggggaggagaataat
attgtccacaaccagaaggtggagattctgagaaagatgttacagaaagagcaggaacgg
ctgcagtctctgcaagaagagtataaccgatcacccgcaacgcgactgttcaaagagata
caggaagcgaagaagcacattcctcagctgcaagagcagttgtccaaagccacaggctgt
actcaggatggagtcttgtcctccaggtctgtaacagactcgctgcagatcaatgaagtg
gaggcagagagtggggattgtgtgagcaaactagattacagtggtgacagcccctcccga
ccaaacagtgacattactgatagtccacgcagtggcttgaaggagcgggtttatccagat
gagagcccagagaagactgaggttcaagatactgattcccagtccagtgttggaagtcct
ttatcccgagtggtgcctcagatcattggagcagaggatgatgactttgacactgaacag
gagcagattaatggacagtgcagctgtttccaaaacattgagctcctgaaatctcgccca
gctcacctggctgttcttctgcatcatgtggtgtcccagtttgaccctgccgcattgttg
tgttacctttacacagacttgtacaagcagaccaactccaaagagactcggcgtgtcttc
cttgagttttaccagttcttcttggaccgagctgcaaacctgaaagttccagttccagat
gaaatctccttagaactagacagaagaaggccagaactccttcctgaagagcttcatcgt
cagtttatacaaactatgcaagataaagtctgtccagaagttcaaaggaatctggaagat
ttcaggcagaaacgtagtatgggattgaccctggcagaaggagagctaactaagctggat
gcagagagagttcgtgaccggattgcgatggagaaggaaagagcatgtgcagagcagatt
attgctaaaattgaggaagtcttgatgacatctcagcctttggaagaagacaagagttcc
acaatgcagtatgtgattcttacctacatgaaacacctgggagtcaaagttaaagaacct
cggaacctggagcagaagcgtggccgtattggtttcttgccaaagatcaaggtacaaagt
atcaagaaagagaaagaaggagaggaaaaaggaaagagaagaggctttcctaatattctg
ggcccaccaaggagaccaagtcgacatgatagcagtgcaattggcagagccatggaaatg
caaaagccccgccatctaaagcatgtacctccagcatcttcggttagcccagagccacca
gattctagcaagatgcgccagagtgggtcctccagtgaaggaacagatgggccataccca
cctgccaacccaatgtctcctttggcaatgggtcccttttcctctccagagggaagcaag
gacagtgaaacaggtttgaagcagactggagaagctccacctgccattgactgtatggaa
ggcacaccccgcacacctaataatacctttgaatttccatctcctttggaaaacttgcag
gaggaggagggagaatcagagagaatggttgacatgggaacaccaaagccttttcgcaag
atggacagtgttggtttcgcggatgtacaaagtgaagatgagctgtatgattttgacatg
gacatggaccctcccaactggcagcaacttgtgagccgggaagtgttgatggggctgaaa
ccctatgaaatcaagcgccaagaagtaattaatgagctgttttacactgagagagctcat
gtccgtacgctgaaggttctgcataatgtcttctaccagcgtgtcacccgggaggggatc
ctgaactccaatgacaaacggaagatcttttcaaatctggaggatatccttgggcttcat
gttgcattgaatgatcagatgaaagccgttcgaaaaaggaacgagacatctgttattggc
caaattggggaagacctgctttcctggtttagtggaccagcagaggagaagctgaaacat
gcaactgccactttctgcagtaaccagccctttgctctagaggtcatcaagtcgcgccag
aagaaggactctcgcttccagacctttgtgcaggatgctgagagtaaccccctgtgtcga
cggttgcagctgaaggatatcattcccacagagatgcagaggttgactaagtaccccctt
ctgctggataacattgctaagtacacagaactgcctgaagagaaagagaaggtgaagaaa
gcagcagatcattgtcgtcagatccttaaccacgtgaaccaggctgtcaaagaggctgag
aacaagcagcatttggaagattaccagcgtcgtctcgacttgtcccccttgaaacagtct
gaggatcccatgatggatgagttcaggaacttggatctaacaaagaggaaaatgcttcat
gaaggacctctgacttggaaggttaatcgtgacaaaactatcgatctctacactctgctc
ctggaggacattctggtgctgttgcagaaacaagatgataaactggtactgaagtgtcac
agtaaaatcttggcatcaacagctgacagtaaacacaccttcagtcctatcatcaaactg
aacactgttctggttcgtcaggtggcaacagataacaaagctttcttcgtcatctccatg
tcagaaaacggcgctcatatttatgaactggtggcacagactgtgtcagaaaagaatgta
tggcaggacctgatagctcagatggcagggactgtaaaaatggggaataccagaagagtg
attccattaccacagtcaggacctggcgaagaagagcgtgaagaagaagaacagcagaag
ctcaaagagcagcatgacattcctgccagtagcttacaaagtccagataaagatttgggc
ctcgaatctcccttaatactaaatgctcagtcttcttcactcatcatgtctgaaaagtcc
aaggtagaaagtctccttgcatcagaaggacagtttgataaggtgcagcaggcagacctg
acacttaaagattcttctgcatgctatgaacacacaaccaccagtttatcttccgtatca
gaagggcagtgggcattggatgcgttaaggaacttgggcttgctgaaacagttgttggtg
cagcagcttggcttctctgagaaggggacccttgaagaccggcagcgcttccccaggttt
aggaccgtttctcaagaagcccagacggagggtggaaacgagcctggactacagcaccct
gagaatagcaaattccaccagcctggaacagacagagcgctcccaagaaccggaactaat
gagtctacagctagttatggcctccggacttcagctgaatcgccagcttcaggagatgcc
atgcagctgatagagagagaccccagatcgagtagtaacttagcaatagaccgcatgagt
atgaatctggagatctcagccgcagagctggaaggggtgggtgctgatgaaagcggggag
catttttttgatgctcgagaagctcacagtgatgaaaatccatctgaaagtgaattaatg
gaaaggaaggaggaagaggatgtgcaaatacggatctcaggaaattatttgatcctcgac
ggatatggaacagtgcaggagagctccacagatgaggaggtatcatctctagttctccag
tgcaccgcaggtggccgtgcctctttggactctgcacagcagcagccactttccccacgg
gacacccagtcagatggaggaagctccccctttgctgaggagatgatggcctcacgctgg
ggagcagtggaagagtcctgctcatttgtagcaagccctcacttctctatagagtcacgt
gtgcagatgttgcagtatattcaaaagatagaggatgaccttgaaaagttaaaggaggtt
gaggaagactacaccattctccgacgccaagggctggctggatcagcctccacaggagag
cactcaggtttcacctacttcaggagctctcacagggctgagactatgctgactgcagga
aaggttggttga
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integrated database retrieval system
