KEGG   Psittacula echo (Mauritius parakeet): 308229646
Entry
308229646         CDS       T12082                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform 1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
pech  Psittacula echo (Mauritius parakeet)
Brite
KEGG Orthology (KO) [BR:pech00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pech03036]
    308229646 (KDM4B)
Enzymes [BR:pech01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     308229646 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     308229646 (KDM4B)
Chromosome and associated proteins [BR:pech03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    308229646 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD SLX1_C DUF7141
Other DBs
NCBI-GeneID: 308229646
NCBI-ProteinID: XP_080489938
LinkDB
Position
24:2964593..3046707
AA seq 1201 aa
MGRIRRLSTAKRPIATKVVAAAANEHGEEAGGRCWPRGAALSSQPPFRPGPSAGPLSAPL
TGSPVPPLPPQPLPSGTARGPRPLRRTRNMGSEVPSPQNPGCKIMTFRPTLEEFRDFGKY
IAYMESQGAHRAGLAKVIPPKEWKPRKTYDDIDDMIIPAPIQQVVTGQSGLFTQYNIQKK
PMTVGEYRRLANSEKYCTPRHQDFEDLERKYWKNLTFVSPIYGADISGSLYDADVEEWNI
GNLNTLLDMVEHECGIIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYA
IPPEHGKRLERLAKGFFPGSSQGCDAFLRHKMTLISPSILKKYGIPFDRITQEAGEFMIT
FPYGYHAGFNHGFNCAESTNFATLRWIDYGKMATQCTCRKDMVKISMDVFVRVLQPERYD
LWKQGKDITVLDHMKPTALTSPELDAWNETKAELKTKLLRRIGDEEEDNKHRSQRKRSQP
RRHKTEDQKSLGDVMAMETALDDVKVKEELKRGPDLEEEERSKVIEGEGDCKVKARPPKV
KGERKRKHLFHQHQHHLQAPPAPLQQQQPPPAAQQPLAEGEASTARPPVPPAVPTSTTGG
KSLSPTPLNIIQPLEAPVEEDDFKPRPIIPMLYVVPRTKKVVFDKERMSCQQAFEQFATQ
KSPSWQEQAVPMEISGKEEENAEAENREIATEAGDLQTASAFSKMKMEIKKSRRHPLGKP
PTRSPLSVVKQETSSDEETFPFSGEEDMSDLEALKSLISLQWKNKVPNFPAERKFNAAAA
LSEPYCAVCTLFYPYNQSLQMDKEAVPVSVAETSSFVHLSKCGQKTKPLIPEMCFTSSGE
NTEPLPSNSYIGEDGTSPLISCAKCCLQVHASCYGIRPDLVNESWSCSRCSANAWAAECC
LCNLRGGALQMTTDGRWVHIICAIAVPEARFLNVIERHPVDISAIPEQRWKLKCVYCRKR
MKKVSGACIQCSYEHCSTSFHVTCAHAAGVPMEPDDWPYVVSITCFKHKAANQNIPFRRE
VTLGQTVITKNRNGLYYRCKVIGTTTQTFYEVNFDDGSYSDNVYPESIISRDCVQLGPPP
EGELVQLQWTDGIIYKAKFIAAQISQIYQVEFEDGSQLMVKRGDIYTLEEELPKRVKSRL
SLSTGAPQEDVFSGDEVRAAKRPRLGNSRNPEEYGQNPDYLAFMESLLQTQYQPGTQSNM
F
NT seq 3606 nt   +upstreamnt  +downstreamnt
atgggtaggatccgccgcctctcaacggcgaagcgcccaatcgcgacgaaggtggtggcg
gccgcagccaacgagcacggcgaggaggcgggcggcaggtgctggccgcggggcgctgcg
ctctcctcacagccccccttccgccctggccccagcgccgggccgctcagcgctccgctg
acggggagcccggtaccgccgctgccgcctcagccgctgccgagcgggaccgcccgcggg
cccaggcccttgcgtcgtaccagaaacatggggtcggaagtgccgagcccgcagaaccct
ggatgcaagatcatgacctttcgtcccacccttgaggagttccgggactttgggaagtac
attgcgtacatggaatcacaaggagcccaccgagcggggctggccaaggtgattcctccc
aaggaatggaagcctcggaaaacctatgatgacatagatgacatgattatcccagctcct
attcagcaggttgttactgggcagtcggggctgttcacccagtataatatacagaagaaa
ccgatgactgtgggagagtaccggcgtctggctaacagcgagaagtactgtactccacgc
catcaagattttgaagacttagagcgcaaatactggaagaatctcacatttgtctcacca
atttatggggctgatatcagtggctcactgtatgatgccgatgtggaagaatggaatatt
ggcaatctgaacaccctcttagatatggtggaacatgagtgtggcattattatagaaggt
gtaaacactccctacctctactttgggatgtggaagacaacatttgcgtggcatactgag
gacatggatctgtacagcatcaactacttgcattttggggagccaaaatcctggtatgcc
atacctccagagcacggcaagagattggaacgcctggcaaaaggattttttccaggaagt
tctcagggatgtgatgctttcctccgtcacaagatgaccctcatttcaccctcgatcttg
aagaaatatggcattccttttgaccggatcacccaggaagctggagaattcatgattaca
tttccttatggataccatgccggcttcaaccatggcttcaactgtgctgagtctaccaac
tttgctactttgcgatggatcgactatggaaaaatggcaacccaatgtacgtgccgcaag
gacatggtgaagatctccatggatgtctttgtgcgggttttgcaaccggaacgttacgat
ttatggaaacaaggaaaagacatcaccgtgctggaccacatgaaacccacagctctgact
agcccagaactagatgcctggaatgagacgaaggcggagttgaagactaaactgcttcgc
aggataggagatgaggaagaggacaacaaacaccggtctcagcgtaaaagaagtcaaccc
agaagacataaaacagaggatcagaagtctcttggagatgtcatggctatggaaactgcc
ttggacgatgtgaaagtaaaagaggaactgaaaagagggccagacctagaggaagaggag
agaagcaaagtgattgagggagaaggtgactgcaaagtgaaggctcgtcctccgaaggtg
aaaggggagaggaagaggaagcaccttttccaccaacaccagcaccatctacaagcgcct
cctgctcctctgcagcagcagcagccacctcctgcagcccagcagccactggcagagggt
gaggcatcaacagcacggccgccagtgcctccagcagtgcccacctcgaccacaggaggg
aagagcttgtctccaactcccctcaacatcatccagcccttggaggcaccagttgaggaa
gatgactttaaacctcggccgatcattcccatgctttacgtggttccacggaccaaaaag
gtggtgtttgacaaggagcgcatgtcctgccagcaggccttcgagcagtttgccacgcag
aagagtccgagttggcaggagcaggcagtccctatggaaatctctgggaaggaggaggag
aatgcagaagcagaaaatagagagattgctacagaagccggtgatttacagactgcttct
gctttctcaaaaatgaagatggaaataaagaagagtcgtcgtcatcccctgggcaaaccc
ccaacccgctccccactgtcggtggttaaacaggagacctcgagcgatgaagaaacattt
ccattttctggagaggaagatatgagtgacctggaggctttgaagtccttaatttccctc
cagtggaagaataaagtacctaatttcccagctgaaagaaaattcaatgcagccgctgcc
ctgagcgagccgtactgtgctgtctgtaccctcttttacccctataaccagtccttacag
atggataaagaagctgtcccggtctctgtagcagagacctcctctttcgtccacctttcc
aagtgtggacagaagaccaagcctctgatcccggagatgtgctttacctcaagtggagaa
aacacggagccgcttccttcaaattcctatattggagaagatggaaccagtcccttgata
tcctgtgccaaatgctgcctgcaggttcatgctagctgttacggaatacgtccagacttg
gtgaatgaaagttggtcttgctcacggtgctcagccaatgcgtgggcagcggagtgttgc
ctgtgcaatctcaggggaggagctcttcagatgaccactgatgggcggtgggtccatata
atctgtgctattgctgtccctgaggcccgttttctcaatgtaatagagcgtcatcctgtg
gacattagtgctattccagagcagaggtggaaactgaaatgtgtgtactgtcggaaacgg
atgaagaaagtgtctggtgcctgcatccagtgctcctacgagcactgctccacctccttc
cacgtcacctgcgcgcacgcagccggcgtgcccatggagccggatgactggccctatgtt
gtatccatcacctgcttcaaacacaaagcagctaaccagaatatcccatttcgaagggag
gtgactctcgggcagactgtgatcacaaagaaccggaatggactctactacagatgtaaa
gtgattggcacgaccacacagactttctatgaagtaaactttgacgatgggtcatacagt
gacaacgtttacccagaaagcattattagcagagactgtgtccagttgggaccccctcca
gagggtgagttggttcaactgcagtggacagatggaatcatctataaggccaagtttatt
gcagcccagatcagccagatttaccaggttgagtttgaagacggttctcaactaatggta
aagcgtggtgatatctacaccttggaggaagagcttcccaagagagtgaagtctcgcctg
tccctcagcactggggcccctcaggaagatgtgttttcgggagatgaagtgagagcagcc
aaacgtccccggctggggaattcacggaatccggaagaatatggacaaaacccagattac
ttggcctttatggagagcctcttgcagacacagtatcagccgggaactcagagcaacatg
ttttaa

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