Psittacula echo (Mauritius parakeet): 308230773
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Entry
308230773 CDS
T12082
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pech
Psittacula echo (Mauritius parakeet)
Pathway
pech04120
Ubiquitin mediated proteolysis
pech04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pech00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
308230773 (SYVN1)
04120 Ubiquitin mediated proteolysis
308230773 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pech04121
]
308230773 (SYVN1)
Enzymes [BR:
pech01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
308230773 (SYVN1)
Ubiquitin system [BR:
pech04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
308230773 (SYVN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
U-box_ZFPL1
zf-RING_5
zf_RING_Vps8_fungal
zf-ANAPC11
zf-RING-like
zf-RING_Vps41
FAR1_N
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
308230773
NCBI-ProteinID:
XP_080491830
LinkDB
All DBs
Position
28:2146888..2152960
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AA seq
586 aa
AA seq
DB search
MLCTAVVMVGSLALTTAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSIDLQNENPWDSKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQPPPEAPEQPPPPPQPPQIP
QPPNFPQGILPPFPPGMFPFWPPVAPFPPVPGVQPPNSAENAASGSGATTAAHPADTGAA
TSEPTAPAPGLPLPPPWMGMPWPPLFGFPPMPVPPPGFAGLTDEELRAMEGHDRQNLEAR
LQCLQNIHTLLDAAMVQINQYLTVLATIGSPRPAPQPQSSAAEAPATIRTDTGTDPSAPA
GAEGFTAPAAEEDEEEEEGDGSSSMEEPDTAELRRRRLQKLAAPSH
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgctctgcaccgcggtggtgatggtggggagcctggcactgacgactgctgtggtggct
cacgcctattacctgaagcaccagttctaccccacggtggtttacctcaccaaatccagc
cccagcatggctgttctctacatccaggcctttgtgctggttttcctcctggggaagttc
atgggcaaggtgttcttcgggcagctgcgggcggcggagatggagcacctcctggagcgc
tcgtggtacgcggtgaccgagacctgcttggccttcactgtcttcagggacgacttcagc
cctcgcttcgtcgccctcttcaccctcctcctcttcctcaagtgcttccattggttggct
gaagaccgggtggactttatggaaaggagcccaaacatctcctggcttttccacttccgc
atcgtctccttgatgttcctgctgggaatcctggacttcctcttcgtcagccacgcgtac
cacagcatcctcacccgaggagcttcggtccagctcgtcttcggctttgagtatgccatc
ctcatgaccatggtgctcaccatcttcatcaagtacgtgctgcactccatcgacctgcag
aacgagaacccctgggacagcaaagccgtctacatgctctacacagagcttttcaccggc
ttcatcaaggtcctgctctacatggccttcatgaccatcatgatcaaagtccacacgttc
cccctcttcgctatccgccccatgtacctggccatgaggcagttcaagaaggcggtgacg
gacgccatcatgtcccgccgggccatccgcaacatgaacacgctgtatcccgacgccacc
ccggaggagctgcaggccatggacaacgtctgcatcatctgccgcgaggagatggtgacg
ggcgccaagcgcctgccctgcaaccacatcttccacaccagctgcctgcggtcgtggttc
cagcgccagcagacgtgtccgacgtgccgcatggatgtgctccgggcatccctcccggca
cagccgcctccggaagcaccggagcagccccccccaccccctcagcccccccagatccct
cagccccccaactttccccagggaatcctgcccccattcccaccgggaatgtttcccttc
tggcccccggttgctcccttcccaccagttcctggtgttcaaccacccaacagtgctgaa
aacgccgcttcgggctctggtgctaccacggccgcccatcccgctgacaccggcgctgcc
acatcagaacccacagccccggctccgggtcttcccttgccaccaccatggatgggaatg
ccgtggccacccctctttggcttcccaccgatgccggtgccaccgcccggctttgccggc
ctcacggatgaggagcttcgggccatggaaggccacgaccggcagaacctggaggcgcgg
ctgcagtgcctgcagaacatccacacgctgctggatgcggccatggtgcagatcaaccaa
tacctcacagtcctggccaccatcgggtcgccccggcccgctcctcagccccaatccagc
gctgcggaggcgcctgccacgatccgtacggacaccggcaccgatcccagcgcgccggca
ggcgccgagggcttcaccgcgccggcggcggaggaggacgaggaggaggaggaaggcgac
ggctcatcctcaatggaggaaccggacacagcggagctgcgccggcgccggctacagaaa
ctggcagcgccttcccactga
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