KEGG   Psittacula echo (Mauritius parakeet): 308230948
Entry
308230948         CDS       T12082                                 
Symbol
LOC308230948
Name
(RefSeq) alpha-actinin-4 isoform 1
  KO
K05699  actinin alpha 1/4
Organism
pech  Psittacula echo (Mauritius parakeet)
Pathway
pech04510  Focal adhesion
pech04517  IgSF CAM signaling
pech04518  Integrin signaling
pech04519  Cadherin signaling
pech04520  Adherens junction
pech04530  Tight junction
pech04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:pech00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    308230948 (LOC308230948)
   04518 Integrin signaling
    308230948 (LOC308230948)
   04519 Cadherin signaling
    308230948 (LOC308230948)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    308230948 (LOC308230948)
   04520 Adherens junction
    308230948 (LOC308230948)
   04530 Tight junction
    308230948 (LOC308230948)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    308230948 (LOC308230948)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pech04131]
    308230948 (LOC308230948)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pech04812]
    308230948 (LOC308230948)
   04147 Exosome [BR:pech04147]
    308230948 (LOC308230948)
Membrane trafficking [BR:pech04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    308230948 (LOC308230948)
Cytoskeleton proteins [BR:pech04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     308230948 (LOC308230948)
Exosome [BR:pech04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   308230948 (LOC308230948)
  Exosomal proteins of colorectal cancer cells
   308230948 (LOC308230948)
  Exosomal proteins of bladder cancer cells
   308230948 (LOC308230948)
SSDB
Motif
Pfam: Spectrin CH EFhand_Ca_insen EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_7 XisI
Other DBs
NCBI-GeneID: 308230948
NCBI-ProteinID: XP_080492124
LinkDB
Position
29:complement(404102..437756)
AA seq 922 aa
MVDYHRDRAQAAPAAGPNGDYMAQEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQ
IENIDEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDFIASKGVKLVSIG
AEEIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFHI
SWKDGLAFNALIHRHRPELIEYDKLRKDDPVTNLNNAFEVAEKYLDIPKMLDAEDIVGTL
RPDEKAIMTYVSCFYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYEKLASDLLQWIQ
RTIPWLEDRSPQRTIAEMQQKLEEFRHYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNRP
AFMPSEGRMVSDINTGWQRLEQAEKGYEEWLLTEIRRLERLEHLAEKFRQKASIHEAWTE
GKEALLQQRDFEAATLSDIKALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPS
VNARCQQICDQWDVLGSLTHSRREALERTEKQLESIDELHLEYAKRAAPFNNWMESAMED
LQDMFIVHTIEEIQGLIAAHEHFKSTLAEADAEREAILGLQREAQRRAELHGVTGAASNP
YTSVTPHVISCKWERVQQLVPKRDQALLEEQSKQQSNEHLRRQFAGQANVVGPWIQTKME
EIGRISIEMHGTLEDQLEQLKLYEQSIVDYKPNLDLLEQQHQLIQEALIFDNKHTNYTME
HLRVGWEQLLTTIARTSNEVENQILTRDAKGISQEQMQEFRASFNHFDKDHGGALGPEEF
KACLISLGYDVENDRQQRRGSADTDDFRALLPAGCSLGDAEFNRIMSLVDPNGSGSVTFQ
AFIDFMSRETTDTDTADQVIASFRVLAGDKNYITAAELRRELPREQAEYCIARMAPYRGA
DAGPGALDYKAFSTALYGESDL
NT seq 2769 nt   +upstreamnt  +downstreamnt
atggtggattaccaccgggaccgggcgcaggccgcgcccgccgccggccccaacggggat
tacatggcccaggaggaggactgggaccgggacctgctcctcgaccccgcctgggagaag
cagcagcgaaagaccttcacggcctggtgcaattcccacctgcggaaagccgggacccag
atcgagaacatcgacgaggatttccgggatggcctcaagctgatgctgctgctggaggtc
atctcaggcgagcgcctcccgaagccggagcggggcaagatgcgggtgcacaagatcaac
aacgtcaacaaggccctggacttcatcgccagcaagggcgtgaagctcgtctccatcggc
gcggaagagatcgtcgacggcaacgccaagatgacgttgggaatgatctggaccatcatc
ctgcgcttcgccatccaggacatctcggtggaagagacctcggccaaggagggtttgctg
ctctggtgccagaggaagacggcgccgtacaagaacgtcaacgtccagaacttccacatc
agctggaaggacggcttggccttcaacgccctcatccaccggcaccggccggagctcatc
gagtacgacaagctccggaaggacgaccccgtcaccaacctcaacaacgccttcgaggtg
gccgagaagtacctggacatccccaagatgctcgatgccgaggacatcgtgggcacgctg
cggccggacgagaaggccatcatgacctacgtgtcctgcttctaccacgccttctcgggc
gcccagaaggccgagacggcagcgaaccgcatctgcaaggtcctggctgtcaaccaggag
aacgagcacctcatggaggactacgagaagctggcttcggatctcctgcagtggatccag
cgcaccatcccgtggctcgaggaccgcagcccccagaggaccatcgcggagatgcagcag
aagctcgaggagttccggcactaccggcgcgtgcacaagccccccaaggtgcaggagaag
tgccagctggagatcaacttcaacaccctgcagaccaagctgcgcctcagcaaccgcccg
gccttcatgccctccgagggcaggatggtgtcggacatcaacacgggctggcagcgcctg
gagcaggccgagaagggctatgaggaatggctgctgaccgagatccggcgcctcgagcgc
ctcgagcacctggccgagaagttccggcagaaggcgtccatccacgaggcctggactgaa
ggcaaggaggccctgctgcagcagagggacttcgaggcggccacgctctccgacatcaag
gcgctgctccggaagcacgaggccttcgagagcgacctggccgcgcaccaggaccgcgtg
gagcagatcgcggccatcgcccaggagctcaacgagctggattactacgactcgcccagc
gtcaacgcgcggtgccagcagatctgcgaccaatgggatgtgctgggctccttgacccac
agcaggcgggaagccctggagcgcaccgagaagcagctggagagcatcgacgagctccac
ttggaatacgccaagcgggcagcgcccttcaacaactggatggagagcgccatggaggac
ctgcaggacatgttcatcgtgcacaccatcgaggagatccagggcctcatcgccgcgcac
gagcacttcaagtccacgctggccgaggcggacgcggagcgcgaggccatcctgggcctg
cagcgggaggcgcagcgccgcgccgagctgcacggggtcacgggcgccgccagcaacccc
tacacctccgtcaccccccacgtcatcagctgcaagtgggagcgggtccagcagctggtg
cccaagcgggaccaggcgctcctggaggagcagagcaagcagcagtccaacgagcacctc
cggcgccagttcgccgggcaggccaacgtggtggggccctggatccagaccaagatggag
gagatcggccgcatctccatcgagatgcacggcaccttggaggaccaactggagcagctc
aagctctacgagcagagcatcgtggattacaaacccaacctggacctgctcgagcagcag
caccagctcatccaggaggccctcatcttcgacaacaagcacaccaactacaccatggag
cacctgcgggtgggctgggagcagctcctcaccaccatcgcccgcaccagcaacgaggtg
gagaaccagatcctgacccgcgacgccaaaggcatcagccaggagcagatgcaggagttc
agggcctccttcaaccacttcgacaaggaccacggcggagccctgggcccggaggagttc
aaggcctgcttgatcagcctgggctacgacgtggagaacgaccggcagcagcgccggggc
agcgcggacacggacgacttccgagcgctccttcccgcgggatgcagcctgggcgacgcc
gagttcaaccgcatcatgagcctggtggatcccaacggcagcggctccgtcaccttccaa
gccttcatcgacttcatgtcccgggagaccacggacacggacacggccgaccaggtcatc
gcctccttccgcgtcctggccggcgacaagaactacatcacggcggccgagctgcggcgg
gagctgccccgggagcaggccgaatactgcatcgcccgcatggctccgtaccgcggcgcc
gacgccggccccggcgccctcgactacaaagccttctccaccgccctctacggagagagc
gacctgtga

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