Psittacula echo (Mauritius parakeet): 308231847
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Entry
308231847 CDS
T12082
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pech
Psittacula echo (Mauritius parakeet)
Pathway
pech04137
Mitophagy - animal
pech04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pech00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
308231847 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
308231847 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pech03019
]
308231847 (VCP)
03009 Ribosome biogenesis [BR:
pech03009
]
308231847 (VCP)
04131 Membrane trafficking [BR:
pech04131
]
308231847 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pech04147
]
308231847 (VCP)
Messenger RNA biogenesis [BR:
pech03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
308231847 (VCP)
Ribosome biogenesis [BR:
pech03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
308231847 (VCP)
Membrane trafficking [BR:
pech04131
]
SNARE
SNARE associated proteins
Others
308231847 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
308231847 (VCP)
Exosome [BR:
pech04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
308231847 (VCP)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
AAA_7
ATPase
AAA_18
DUF815
ABC_tran
IstB_IS21
nSTAND_NTPase5
NB-ARC
TsaE
AAA_24
ResIII
Viral_helicase1
NACHT
SLFN-g3_helicase
Zot
Motif
Other DBs
NCBI-GeneID:
308231847
NCBI-ProteinID:
XP_080493775
LinkDB
All DBs
Position
Z:complement(11550760..11574038)
Genome browser
AA seq
806 aa
AA seq
DB search
MASGSDSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGTGGGSGSNVYSEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggatccgattctaaagcagatgacttatcgactgcaattctgaagcagaag
aacaggcccaatcggttaattgttgatgaagccatcaatgaagacaacagtgttgtgtca
ctgtctcaggcaaaaatggacgaattgcagctgttcagaggagacactgttctgctaaaa
ggaaagaagaggagagaagcagtctgcattgttctgtcagatgatacctgttcagatgag
aagattcgtatgaacagggttgttcgcaacaacctgagagtgcgcctgggtgatgtgatc
agcatccagccttgcccagatgtgaaatacggcaaacgtatccatgtgctgccgattgat
gacactgtggaagggatcacggggaacctgtttgaagtctatctcaagccgtacttcctg
gaagcgtacagacccatcaggaaaggtgacatcttcctggtacgtggagggatgcgtgca
gtggagttcaaagtggtggagacagacccaagtccatactgcatagtggctccagacaca
gtgatccattgtgaaggagagcccatcaaacgagaggatgaagaggagtcactgaatgaa
gtgggctatgatgacattggtggctgccggaagcagctggctcaaatcaaagagatggtg
gagcttcccctccgacaccctgcactcttcaaggccataggggtgaagcctccacgtggg
atcctgctgtatggtcctcctggcactggtaaaacactgattgcccgagctgtggccaat
gaaacaggagctttcttcttcctgatcaacggtcctgagatcatgagcaagctggctggt
gagtctgagagcaacctgaggaaagcctttgaagaagcagagaagaacgctcctgctatc
atcttcattgatgagctggatgccattgctcctaagagagagaagacacatggagaagtg
gaacgtcgcatagtgtctcagctgttgactcttatggatggactgaagcagagagcacat
gtgattgtcatggcagctaccaacagaccgaacagcatcgacccagcactcaggcgattc
ggtcgttttgacagagaggtagatattggtatcccagatgccaccgggcgcctggagatc
ctgcagatccacacaaaaaacatgaagctggctgatgatgtggatctggagcaggtggca
aacgagacccatggccatgttggtgctgacttggctgctctttgctcagaagctgctctt
caggctatcagaaagaagatggatctcatagaccttgaagatgaaacaatcgatgctgaa
gtgatgaactcgctggctgtgaccatggatgacttcaggtgggctctgagccagagcaac
ccttcagctcttcgggagactgtggtggaggtgccacaagttacctgggaagatattggt
ggtctagaagatgtaaagagagaactccaggagcttgtacagtatcctgtggagcatcca
gacaagttcctcaaatttggcatgacgccatcgaaaggggttctgttctatgggccaccg
ggttgtggtaagacactgctggccaaagccattgccaatgagtgccaggcaaacttcatc
tccatcaaggggccggaattgctcaccatgtggtttggtgagtctgaagccaacgtgcgt
gagatctttgacaaggcccgccaagcagccccttgtgtgctcttctttgatgagctggac
tccatcgcaaaggctcgaggtgggaacattggcgatggtggcggtgctgcagaccgtgtc
atcaaccagatcctgacagagatggatggcatgtccaccaagaagaacgtcttcattatc
ggtgccaccaaccggccggacatcattgacccagccatcctgcgccccggccgcctggat
cagctcatctacatccctctgcctgatgagaagtcccgggtggctattcttaaagccaac
ctgagaaaatcaccagttgctaaggatgtcgacctggatttcctggctaagatgacgaat
ggcttttcgggggccgatctgacagagatttgccagcgtgcctgcaaactggccatccgc
gagtccatcgagagcgagatcaggcgggaacgcgagaggcagaccaacccctccgccatg
gaagtggaggaggacgaccctgttcctgagatccgccgggatcactttgaggaggccatg
cgcttcgcccgccgctcagtcagtgacaacgacatcaggaaatacgagatgtttgcacag
actctacagcagagccgtggctttggcagcttcaggttcccatctggtaaccagggtggt
gctggtcccagccaaggcactggaggcggcagtgggagcaacgtgtacagtgaagacaat
gatgatgatctctatggttaa
DBGET
integrated database retrieval system
