Psittacula echo (Mauritius parakeet): 308232395
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Entry
308232395 CDS
T12082
Symbol
SKIC3
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
pech Psittacula echo (Mauritius parakeet)
Pathway
pech03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pech00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
308232395 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pech03019
]
308232395 (SKIC3)
Messenger RNA biogenesis [BR:
pech03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
308232395 (SKIC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_1
TPR_2
TPR_14
TPR_16
TPR_17
TPR_11
TPR_8
TPR_12
TPR_CcmH_CycH
CFAP70_TPR_C
CFAP70_mid_TPR
ANAPC3
TPR_9
TTC22_N
CABIN1_N
ARM_TT21_C
TPR_15
MSC6_N
TPR_30
Retrotran_gag_2
BTAD
HAT_Syf1_M
Fis1_TPR_C
Imm71
TPR_20
Motif
Other DBs
NCBI-GeneID:
308232395
NCBI-ProteinID:
XP_080494684
LinkDB
All DBs
Position
Z:complement(81885629..81936838)
Genome browser
AA seq
1562 aa
AA seq
DB search
MSNKEVKAALKNAREAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGVAAAELEQPDQAK
GAYKKAIELEPNQLLAWQGLANLYEKSNQTDVKEDLADVYQKLLELYASGDKQKWCDVCT
KLVELYHQEKKYLQVAETWQKLINMKQKEGAENTELHQLWKRMIQLLKDSTQYQDKMTEQ
LLVTAFEHALKSFDTIPGEDHQNLYKDFIQCLSKFPHEATKLEKACNDMMALYPSVSYPL
EVLCLHFVQSGTLSEEALCCFSRLLEMDPSSGPGIIGFGVKSLQEKKYKEAVKSLTEGLQ
KTSQCPAAWHYLADAQMKLHKHRDAVLSCNQALKALGTSEGHNLWWKNLVLQLKAEALIK
IADASAAEEAIKAIEQIVDANSDPVVLAISGQAYLKKGLMNQASKISQELLLSHPDLAES
HALEGFIHYSQKNYEQAERSFLNAIERKAETAEYHQYLGLTYWFMSDDTRKDKGKALTQF
LKAAKLDSYLGIVFRYLGNYYRDIAGDKSRARGCYKKAFELDGTDEESGTGAVDLSVELG
DMDTALSILNEVTERASPGTAKWAWLHRGLYYLRTDQLSQAVADLQAAVRADPKDSNCWE
SLGEAYLNRGSYSTALKSFRKASELNPGLVYSVYKAAAVEQILGKYENAIATYQRILKDT
EDYVPALKGLGECYLSLARSALDNFFDRKAMDCIEQALEFFTRATKQRPDVSCLWKLLGD
TCTSVHVVSPAKVNVQVLGSLLGKNTATQRLKKSELLVLGGRCYGRALKLMPLPSIWCDL
GINYYRQAEHLTAVGSDMNEISELLEKSLQCLKKAVRLDSNNHLYWNALGVVASCSAIGN
YALAQHSFIKSVQAEKINVVAWTNLGVLYLTTGNIEQAHEAFKIAQSLEPSYLLCWVGQA
LIAETVDSYDTMDLFRHTTELSMHTEGAKGYAHWVCSTLQDKSNRNTELYLYNIVQMNAI
PAAQVVLSKYTERNPDDASSFTMLGYLNEHLNLKRQATDAYERAASLMKNSADTEKYNIA
MQNYGRCLCALGECDKAIEVYTSIPLTKFDGIVGIALAYFKKGLIQESIKAYEKAFCVAE
SEEDKANIFTALAIIHYKRNEVNAAKTLVFQCLLKEPSMESLMALCTLGLVKEDVTLATA
ALKELLKHEKGKDKIYERCLIASAVYALQGRNVGVQREISKVIHSNPDNPALWSLLSRLV
PLYVPQKAKGGAVAGNVAHALDVNHAKEVLVNIAVNQLAAGHHMLEDEKNNPLKNIQKAV
HLYPDNPAAWAVLMAACHAENTVVCLNNTQPKRTDLEMTLVSRVSAKTGENNLPHHYVQT
LEDWCLCQAITSLEETGKLSEAEALCTKGLKSCPEHPALFLLLRQIQCKQLLQSHKELPD
NILEELHKTVMTNSTSIAAWQWLANVYQSQRMMVGAEMCYRKSLQLASQQGSWSGKLSSL
LRLAMLALEVCMANVSNEHWPSLVQEATTEALKLTSCPLAALLQALLQYNRKMGARETRQ
MLERVVYQPGNPETMVSVARWYLLQHLYAKDDQELIDVLIENAKANGDVRVLELNEKLSA
SA
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaggaggtgaaggcagcattaaagaatgctagagaagcaatacgaaataaa
gaatataaagaagccttaaaacattgcaaggcagtcttgaagcaagaaaaaaataactac
aatgcttgggtatttattggcgtggcagctgctgagttagaacagcctgatcaggccaaa
ggagcatataagaaggctattgaacttgaaccgaaccagctactggcatggcagggatta
gcaaatttgtatgagaaatccaaccaaacagatgtcaaagaagacttagcagatgtttac
caaaagctcttggaactctatgcaagtggtgacaagcagaaatggtgtgatgtatgtacc
aagcttgtggagctgtatcatcaagaaaaaaaatacttacaggtggctgaaacatggcag
aaactaataaacatgaagcagaaggagggtgcagaaaatacagaacttcatcagctttgg
aaaaggatgatccagttactgaaagacagtacacagtaccaggataagatgactgagcag
ttgcttgtgactgcatttgaacatgctctgaagtcttttgacaccattcctggtgaagac
caccaaaacctttacaaggacttcattcagtgcttgtcaaaatttcctcatgaagcaact
aagttggaaaaagcctgtaatgatatgatggctttgtatccttctgtgagttatccttta
gaagtactttgcttgcattttgttcagtcaggtactttgtcagaagaggccctgtgctgt
ttttctaggcttttggagatggacccaagtagtggtccaggcattattggttttggtgta
aaaagcctccaagaaaagaaatacaaggaggctgttaagagtcttactgaaggtttgcag
aagacaagccagtgtccagcagcatggcattatttggcagatgcacagatgaaacttcac
aaacacagagatgctgtcctgtcctgcaatcaagctctcaaggctcttggaacttctgaa
ggccataatctttggtggaagaaccttgtactccagttgaaagcagaggctttgattaaa
atagctgatgccagtgctgcagaagaagccattaaagcaattgagcagattgtggatgca
aacagtgatccagtggttttagctatcagtggtcaggcttacctgaagaaaggtttaatg
aatcaagcttcaaagatttctcaagagcttctgttgtcccaccctgacctggctgagtca
catgctctagagggtttcatccattattcccaaaagaactatgaacaagcagaaagaagt
tttctaaatgctattgaaagaaaggctgaaactgcagagtatcatcagtacctggggctc
acgtactggttcatgagtgatgacacaagaaaagacaaaggaaaagcactcactcagttc
ttgaaggctgcaaaactggacagctacttgggaattgtctttcgttatttaggtaactac
tacagagacattgctggagacaaaagtagagctcgtggttgctataaaaaggcttttgaa
ctggatggaaccgatgaggaatctggaacaggagctgtagacttaagtgtggaacttgga
gacatggacactgctctgtcaatcctgaatgaggtaactgaaagagcaagtcctggtaca
gcaaaatgggcttggcttcatcgtggactttactacctgagaactgatcagctgtcacaa
gcagtggctgatttgcaggcagctgtcagggctgatccgaaggattccaactgctgggag
tctctaggggaggcttatttgaacagaggtagctactcaacagctctaaaatccttcagg
aaagcaagtgagctgaacccagggctcgtgtacagcgtttacaaagctgcagcagttgag
cagattctaggcaaatatgaaaatgctatagcgacctatcagcgaattttaaaggataca
gaagattatgtgcctgcactgaaaggacttggtgaatgctatctgagcttggcaagatca
gcccttgataacttttttgatagaaaggctatggattgcatagagcaggctcttgaattt
tttacaagggcaacaaagcaacgtcctgatgtatcttgcctctggaaactgcttggagat
acctgtactagcgtgcatgttgtttcaccagctaaagtaaatgttcaagttctaggatcc
cttctgggtaaaaacacagccacacagaggctgaagaaaagtgagctgcttgtactagga
ggaaggtgttatggcagagctttaaaactgatgcctttgcctagcatatggtgtgatctt
ggaataaattattatcgacaagcagagcacctcacagcggtgggatctgacatgaatgag
atcagtgaactgctagagaagtctttacagtgtctcaaaaaagctgtgaggcttgacagc
aacaatcatctttattggaatgcacttggtgtggttgcttcctgtagcgctattgggaat
tatgctcttgctcaacattcgttcatcaaatctgttcaagctgagaaaatcaatgttgtt
gcctggaccaacttgggggttttgtatctgacaactggaaatattgagcaagctcatgaa
gccttcaagatagcacagtctctggagccttcttacctactgtgttgggttgggcaggct
cttattgcagagacagtagacagctatgatactatggatcttttcaggcacacaactgaa
ctcagtatgcatactgagggagcaaaaggctatgcccactgggtatgttcaacgctgcag
gataaaagcaacagaaacactgaactatatctgtacaacattgttcagatgaatgctatt
ccagcagcccaggtggtcttgagcaaatatacagaaagaaatccagacgatgcatcttct
ttcacaatgcttggttatttgaatgagcatctgaatctaaaaaggcaggcaacagatgcc
tatgagagggcagcttcattgatgaagaactctgctgatactgagaaatataatatagca
atgcaaaactatgggaggtgtctgtgtgcccttggtgagtgtgataaggccattgaggtt
tatacatcaatacccttaacaaagtttgatggcattgtggggatagcattagcctacttc
aagaaaggactcatacaagaaagtatcaaagcctatgaaaaggccttttgtgttgctgag
tctgaagaagataaagcaaatatcttcactgccttggcaataatacattacaaacggaac
gaagtgaatgctgcaaagacactggtgtttcaatgcttgttaaaggaacctagtatggaa
agtctgatggctttatgcacactaggacttgtaaaggaggatgttacacttgcaacagca
gccctgaaagaattactgaaacatgaaaaaggaaaagataagatctatgagaggtgcctt
attgcatctgctgtttatgcattgcaaggcagaaatgtgggggtccagagagaaatctcc
aaagtaatacacagtaaccctgataatcctgccctctggtctcttctgtcccggctggtt
ccactgtatgtgccacaaaaggcaaaagggggagctgtggcaggaaatgttgcacatgca
cttgatgtaaaccatgcaaaggaagtcctggtgaacatagcagttaatcagctggcagca
ggacatcacatgttagaagatgagaagaacaatcctctgaaaaatattcagaaggcagtc
cacctctatccagataatcctgctgcctgggcagtgctcatggcagcctgtcatgctgaa
aacaccgttgtctgtctaaacaacactcagccaaagcgaacggatctagagatgacactt
gtatctagagtttcagccaaaactggagaaaataaccttccacatcattatgtccagact
cttgaagactggtgtctgtgtcaagctattaccagtctggaggagaccggtaaactctca
gaagctgaagccctttgtacaaagggtttaaaaagctgccctgagcacccagctttgttt
ttgcttttgagacaaattcagtgtaagcagctgttgcagtctcacaaagaacttccagac
aacatcctggaggagcttcacaagacagtcatgaccaattcaacttcaattgcagcctgg
caatggctggcaaatgtgtatcagtctcagcgaatgatggttggagcagagatgtgttac
agaaagagtctgcagttggcatcacagcagggcagctggagtgggaagttgtccagtctg
ctcaggctagctatgctcgcactggaagtctgcatggctaatgtctcaaatgagcactgg
ccatccttggttcaggaggcaacaactgaagctttgaaacttacttcttgtcccctggca
gctctcctacaagcactgctacaatataatcgcaaaatgggagcaagggagactcgtcaa
atgttggagagagtagtttatcagcctgggaatccagaaaccatggtgtcagtggcacgc
tggtatctcctgcaacatctttatgccaaagatgatcaagaattaatagatgtgcttata
gaaaatgccaaagccaacggagatgttagagttctggaactaaatgagaaattgtcagca
agtgcctag
DBGET
integrated database retrieval system
