Pseudonocardia sp. EC080619-01: AD017_06520
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Entry
AD017_06520 CDS
T04234
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pecq
Pseudonocardia sp. EC080619-01
Pathway
pecq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pecq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AD017_06520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pecq03019
]
AD017_06520
03009 Ribosome biogenesis [BR:
pecq03009
]
AD017_06520
Messenger RNA biogenesis [BR:
pecq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AD017_06520
Ribosome biogenesis [BR:
pecq03009
]
Eukaryotic type
Pre-60S particles
RNases
AD017_06520
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ALL80947
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All DBs
Position
1423582..1424223
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AA seq
213 aa
AA seq
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MTDRLVWIDCEMTGLDLGSDALIEIAALVTDGDLNVLGEGVDVVIACDDAQLDAMPDVVR
DMHARSGLTEEVRAATVTIAEAEERVLAYIRAHVPDARTAPLAGSSIATDRGFLARDMQE
LDAYLHYRMIDVSSVKELARRWFPRVFYAKPEKGLAHRALADIQESIRELAYYRKALFVA
PPGPSTEQAQAAAAAVADVATTANPQAGGGATG
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccggctggtgtggatcgactgcgagatgaccgggctcgacctcggttccgac
gcgctcatcgagatcgcggcgctggtcaccgacggggacctcaacgtcctgggcgagggc
gtggacgtcgtcatcgcctgcgacgacgcgcagctcgacgcgatgcccgacgtggtgcgt
gacatgcacgcgcgctccgggctgaccgaggaggtccgggccgcgacggtgaccatcgcc
gaggcggaggaacgggtgctcgcctacatccgcgcccacgtccccgacgcccgcaccgcg
ccgctcgccggcagctccatcgcgaccgaccgcggattcctcgcccgcgacatgcaggag
ctcgacgcctacctgcactaccggatgatcgacgtcagctcggtgaaggaactggcccgc
cgctggttcccgcgggtgttctacgcgaagccggagaaggggctggcgcaccgcgcgctg
gccgacatccaggagtcgatccgggagctcgcgtactaccggaaggcgttgttcgtggcc
ccgcccgggccgagcaccgagcaggcccaggccgccgcggccgcggtcgccgacgtggcc
acgacggcgaacccgcaggcagggggcggcgcgacggggtga
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