Pseudonocardia sp. EC080619-01: AD017_22660
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Entry
AD017_22660 CDS
T04234
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pecq
Pseudonocardia sp. EC080619-01
Pathway
pecq03030
DNA replication
pecq03430
Mismatch repair
pecq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pecq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AD017_22660
03430 Mismatch repair
AD017_22660
03440 Homologous recombination
AD017_22660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pecq03032
]
AD017_22660
03400 DNA repair and recombination proteins [BR:
pecq03400
]
AD017_22660
Enzymes [BR:
pecq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AD017_22660
DNA replication proteins [BR:
pecq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AD017_22660
DNA repair and recombination proteins [BR:
pecq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AD017_22660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7542
DUF7508
Motif
Other DBs
NCBI-ProteinID:
ALL83297
LinkDB
All DBs
Position
complement(4821075..4822832)
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AA seq
585 aa
AA seq
DB search
MRDVTPCSPQLTFDELGTPLRDVTFCVVDLETTGGSHRADAITEVGAVSVRGGESIGELS
TLVDPGTRVPADVTRLTGITNGMLAGAPPLGAVLPPVLDLLRGSVLVAHNAPFDTGFLRA
ACERHERPWPSPPVLCTARLARAVLPRSECPSVRLGALAAHFGCRTTPDHRALTDARATV
EVLHHLLERIGNLGVQSLEELLQLVKDRAPHRPTTAQRQRRHLAKRVPSEPGVYLFRGAG
DEVLYVGTSGDLHRRVRSYFTAGERRRRVRDMVAQAERVDTVVCAHALEASVRELRLIAA
HRPRYNRRSRNPGRAWWVAPTAETFPRLSVVASPREGALGPFSSQRAATAVLDAALDAVP
LRRCTIRIPARNPSGTPCALHELGRCAAPCAGLQSAEDYAPAVESWRELVEGRSDAPLRA
LADGVDARAADGRYEAAALARDRLAALASGVDRAGTLAGLAGLDEVVGARPDGSGGWQLA
VLRHGRLAAAGNAPRGVRPMPVVEALRDGAQTVLPEPGPLRGAPAEEVRLLYRWLTEGGT
RLVYSTPSWAEPARGGGPWREWADRARDTAHRTGEQSPDEPSHRT
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggacgtgaccccctgctccccgcagctcacgttcgacgagctcggcaccccgctg
cgcgacgtcacgttctgcgtcgtcgacctggagaccaccggcggcagccaccgggccgac
gcgatcaccgaggtcggcgcggtctcggtacggggcggggagtcgatcggcgagctgtcc
acgctcgtcgacccgggcacgcgggtgccggccgacgtgacccggctgaccgggatcacg
aacgggatgctcgccggtgccccgccgctcggtgcggtgctgcccccggtgctcgacctg
ctccgggggtcggtgctggtcgcccacaacgccccgttcgacaccgggttcctccgggcc
gcgtgcgagcggcacgagcgtccctggccgtcgccaccggtgctctgcacggcccggctg
gcccgcgcggtgctcccccgcagcgagtgcccgagcgtgcggctcggggcgctcgcggcg
cacttcggctgtcgcaccacgccggaccaccgggcgctgaccgacgccagggccaccgtc
gaggtgctgcaccacctcctcgaacgcatcgggaacctcggggtgcagagcctggaggaa
ctgctgcagctggtgaaggaccgggcgccgcaccgcccgaccaccgcgcagcggcaacgc
cgtcacctcgcgaagcgggtgccgtccgagcccggggtctacctgttccgcggcgcgggc
gacgaggtgctctacgtcggcacgagcggggacctgcaccgccgggtccgctcctacttc
accgcgggcgagcggcgccgccgggtccgcgacatggtcgctcaggccgagcgggtcgac
accgtcgtgtgcgcgcacgcgctggaggcgtcggtgcgggagctgcgcctgatcgccgcg
caccggccccggtacaatcggcgttcccgcaaccccggccgcgcctggtgggtggcgccg
acggcggagaccttcccgcggctctcggtcgtcgcctcgccgcgggagggcgcactcggg
ccgttctcctcgcagcgggcggccaccgccgtcctcgacgccgcgctcgacgcggtcccg
ctgcgccggtgcaccatccggatcccggctcgcaacccgtccgggacgccgtgcgcgctg
cacgagctcgggcggtgtgccgcgccgtgcgccgggctgcagtccgccgaggactacgcg
ccggccgtcgagtcgtggcgcgagctggtcgagggccgcagcgacgccccgctgcgcgcg
ctggccgacggggtggacgcccgtgccgccgacggccggtacgaggccgccgccctggcc
cgggaccggctcgcggcgctggcctcgggtgtcgaccgggcgggcacgctcgccgggctc
gccgggctcgacgaggtcgtcggtgcccggccggacggcagcggcggctggcagctcgcc
gtgctgcggcacggcaggctcgccgcagccgggaacgccccgcgcggggtccggccgatg
ccggtcgtcgaggcactgcgcgacggggcacagaccgtcctgcccgagcccggaccgctg
cgcggcgctcccgccgaggaggtgcggctgctctaccgctggctgaccgagggcggcacc
cgcctggtgtacagcacgccgtcgtgggcggagccggcccggggtggcgggccgtggcgc
gagtgggcggaccgggcccgcgacaccgcgcaccgtacgggcgagcagtcccccgacgag
ccgtcgcaccgcacctga
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