Pseudonocardia sp. EC080619-01: AD017_23600
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Entry
AD017_23600 CDS
T04234
Name
(GenBank) hypothetical protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pecq
Pseudonocardia sp. EC080619-01
Pathway
pecq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pecq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AD017_23600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pecq03400
]
AD017_23600
Enzymes [BR:
pecq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AD017_23600
DNA repair and recombination proteins [BR:
pecq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AD017_23600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
ALL83427
UniProt:
A0A0P0SG99
LinkDB
All DBs
Position
complement(4999360..5002842)
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AA seq
1160 aa
AA seq
DB search
MSTTAVLSAPTFAVDGPLPSGTVMLEASAGTGKTYTIAALATRYVAEGVAGLDRLMLVTF
GRDATQELRERVRERLVGTERALAAVLAGAEPPSRESDPVVAHLADAGPEEIGLRRARLA
EASASFDAATIATTHQFCRQMLAGLGVAGDNDPDAEFVEHVDDVVTEVVDDFYVRKYANP
QAGKPAFTRAEALALARRAVADPQAELEPRDADPRSVAATRHGFATAVRREVDARKRRLR
IYSYDDMLSRLAEALRDPLRGPAARERLRSRFSVVLVDEFQDTDPLQWEILSLAFHGAPA
TTLVLIGDPKQAIYAFRGADVHSYLRAADAATDRRTLATNRRSDAALLTALERVFDGAAL
GDSEIVVHPVDAHHTARRLTARRDAPLRLRAVDRDRLDLTGRKLGRAPAARRVVARDVAV
DLSELLDGSATWDGEALRPGQVAVLVRTNAQGLLVRDACAEAGVPAVLTGSTSVFTTPVA
QDWLTLLEAVEQPQRSMRLRAAALTRFVGHTVADLCGPEADRLVDRLGADLRAWHQVLAE
RGVAALQEAVFARYAPAQRLLSRPDGERDLTDLRHVGQVLHSVALERHLGPTALTEWLRH
RIGEAARDTSAERSRRLESDADAVQIVTVHRSKGLEFPVVYLPFAWDRWVNDTPDPLLYH
DVPGGAGGDARRLLDVGGTSGPDRAHRTALHLAEEAGEDLRLLYVALTRACSQVVAWWVP
STTTASSSLHRMLAGNRGPGTGPETAAAVPGDANAVQYLRERLAGSDAVVETLHDRDPVR
LPAEADGVRLAAAGFGRTLDTAWRRTSYTALTAAAHAAHHPLDDTAEADAGPAATPGVLT
EPEDEGLSDEPAADGGTGPAGAATGGATSTVDPASVPSPMADLPMGAGFGTLVHAVLEHL
DTTVAAGGDDALRAELVAHVTAELRRQPADVDPEELADALVPVLRTPLGPLAGGRALADV
APADRLSELDFELPLCGGDVPSGRLTLAGLAAVVGRHLGPGDLLHGYADRLGSPELAGQN
LRGYLTGSIDSVLRVDGRFLVVDYKTNWLGPPSVSGPREPLTAAHYTEPRLAAAMADAHY
PLQALLYAVALHRYLRWRLPGYDPEEHLGGVGYLFLRGMCGPATPVTGTGPLAAPCGVFA
WRPPSALVTELSELLDGGVR
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacgaccgcggtcctctccgcaccgaccttcgccgtggacggtccgctgccgtcc
ggcaccgtcatgctggaggcgagtgccgggaccggcaagacctacacgatcgccgcgctg
gccacccgctacgtcgccgagggtgtcgccgggctggaccggctgatgctggtgaccttc
ggccgggacgcgacccaggagctgcgcgaacgggtccgggagcggctcgtcggcaccgag
cgggcgctcgccgcggtgctcgccggcgccgagccgccgtcccgggagtccgacccggtg
gtcgcgcacctcgccgacgccgggccggaggagatcgggctccggcgggcccggctggcg
gaggcgtcggcgtcgttcgacgccgcgacgatcgccaccacccaccagttctgccggcag
atgctggccggactcggggtcgccggtgacaacgacccggacgcggagttcgtcgagcac
gtcgacgacgtcgtgaccgaggtcgtcgacgacttctacgtgcgcaagtacgcgaacccg
caggccgggaagccggccttcacccgggccgaggcactggcgctggcccgccgcgcggtc
gccgacccgcaggccgagctcgagccgcgcgacgccgacccccgctcggtggccgcgacc
cggcacgggttcgccacggccgtccgccgggaggtcgacgcccgcaagcgccggctgcgc
atctacagctacgacgacatgctctcccggctggccgaggcgttgcgcgacccgctgcgc
gggccggccgcgcgcgagcggctgcggtcccgcttctcggtggtgctggtcgacgagttc
caggacaccgacccgctgcagtgggagatcctctcgctcgccttccacggcgccccggcc
acgacgctcgtgctgatcggcgacccgaaacaggcgatctacgccttccgcggcgccgac
gtgcacagctacctgcgcgccgccgacgccgcgaccgaccggcggacgctggcgacgaac
cggcgcagcgacgccgccctgctcaccgcgctggagagggtcttcgacggggcggcgctc
ggcgactccgagatcgtggtgcaccccgtcgacgcccaccacaccgcgcggcggctcacc
gcccggcgcgacgccccgctccgactgcgcgccgtcgaccgggaccggctcgacctcacc
ggccgcaagctcggccgcgcacccgcggcccggcgggtcgtggcccgcgacgtcgccgtc
gacctgtccgagctgctcgacggctccgccacctgggacggtgaggccctgcgcccgggc
caggtcgcggtgctcgtgcgcaccaacgctcagggcctgctggtgcgcgacgcctgcgcc
gaggccggggtgcccgcggtactgaccggcagcaccagcgtgttcaccacgccggtcgcc
caggactggctgaccctgctggaggcggtcgagcagccgcagcggtcgatgcggctgcgc
gcagcggcgctgacccgcttcgtcgggcacacggtcgccgatctctgcgggcccgaggcc
gaccggctcgtcgaccgcctcggcgccgacctgcgcgcgtggcaccaggtgctcgccgag
cggggggtcgccgcgctgcaggaggcggtgttcgcccgctacgccccggcgcagcggctg
ctgtcgcgccccgacggcgaacgcgacctcaccgacctccggcacgtcggtcaggtgctg
cactcggtcgcgctggagcgtcacctcggcccgaccgcgctcaccgagtggttgcggcac
cgcatcggtgaggccgcacgcgacacctccgccgagcgcagccgtcggctcgagtccgac
gccgacgccgtccagatcgtcacggtgcaccggtcgaaggggctcgagttccccgtcgtg
tacctgccgttcgcctgggaccgctgggtcaacgacaccccggacccgctgctctaccac
gacgtcccgggcggcgccggtggcgacgcgcgccggctgctcgacgtcggcgggacctcc
gggcccgaccgcgcgcaccgcaccgcgctgcacctggccgaggaggccggggaggacctg
cggctgctctacgtcgcgctgacccgggcctgcagccaggtcgtcgcgtggtgggtgccg
tcgacgacgaccgcgtcgtcgtcgctgcaccggatgctggccgggaaccgcggcccgggc
accgggcccgagacggccgccgccgtccccggtgacgcgaacgcggtgcagtacctgcgg
gaacggctcgccggcagcgacgcggtcgtcgagaccctgcacgaccgggacccggtgcgg
ctcccggccgaagcggacggggtgcggctcgccgcggccgggttcggccgcaccctggac
accgcctggcggcggacctcgtacaccgcgctcaccgcggccgcccacgccgcgcaccac
ccgctcgacgacaccgccgaggccgacgcggggccggccgccacgccgggggtgctcacc
gagcccgaggacgagggcctgagcgacgagcccgccgcggacggcggcaccggtcccgcc
ggggccgcgaccggcggtgccacctcgacggtggatcccgcgagcgtcccctcccccatg
gcggacctgccgatgggcgccgggttcggcaccctggtgcacgccgtcctcgagcacctc
gacacgaccgtcgccgccggcggcgacgacgcgttgcgggccgagctcgtcgcgcacgtc
accgccgagctgcggcgccagcccgccgacgtcgatcccgaggagctcgccgacgccctg
gtccccgtgctgcggaccccgctcgggccgctggcgggcggccgggcgctggccgacgtc
gcaccggccgatcggctgtccgagctggacttcgagctgccgctgtgcggtggcgacgtg
ccgtcgggccggctcaccctggccgggctggccgccgtcgtcgggcggcacctcggcccc
ggcgacctgctgcacggctacgccgaccggctcggctcccccgagctggccgggcagaac
ctgcgcggctacctcaccggcagcatcgactccgtgctgcgggtcgacgggcgcttcctc
gtcgtcgactacaagaccaactggctcggcccgccgtcggtctccgggccccgggagccg
ctcaccgccgcgcactacaccgagccccggctcgccgccgcgatggccgacgcccactac
ccgctgcaggcgctgctctacgccgtcgcactgcaccgctacctgcgctggcggctcccg
gggtacgacccggaggagcacctgggcggggtcggttacctgttcctgcgcgggatgtgc
ggcccggccacaccggtcaccggtaccggcccgctcgcggcgccgtgcggggtgttcgcg
tggcgcccaccctccgcgctggtgaccgagctgtccgagctgctcgacggaggcgtccga
tga
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