KEGG   Pseudonocardia sp. EC080619-01: AD017_24385
Entry
AD017_24385       CDS       T04234                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pecq  Pseudonocardia sp. EC080619-01
Pathway
pecq03030  DNA replication
pecq03410  Base excision repair
pecq03420  Nucleotide excision repair
pecq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pecq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AD017_24385
   03410 Base excision repair
    AD017_24385
   03420 Nucleotide excision repair
    AD017_24385
   03440 Homologous recombination
    AD017_24385
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pecq03032]
    AD017_24385
   03400 DNA repair and recombination proteins [BR:pecq03400]
    AD017_24385
Enzymes [BR:pecq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AD017_24385
DNA replication proteins [BR:pecq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     AD017_24385
DNA repair and recombination proteins [BR:pecq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     AD017_24385
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AD017_24385
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 HHH_5 DNA_pol_lambd_f HHH_2 ERp29_N
Other DBs
NCBI-ProteinID: ALL85005
UniProt: A0A0P0SK46
LinkDB
Position
5192507..5195230
AA seq 907 aa
MLLDGHSLAYRAFFALPAENFRTGTGQTTNAVYGFTSMLINLLRDEEPTHLAVAFDVSRK
TFRSERFADYKANRTTTPDDFRGQIDLIKEVLGALNIPVFAVDGFEADDLIATLATQAEG
QGFQVLITTGDRDAFQLVTEDVTVLYPKRGVSDLGRIDPAEVDKRYGLTPTQYPDFAALR
GDPSDNLPSIPGVGEKTAAKWVREFGSLAELTDRVDEVKGKAGDNLRANLANVLLNRQLT
ELVRDVDLGAGPEQLEVRAWDRDAVHRLFDELEFRVLRERLFSTLSSAEPEAEEGFEISA
EVVEPGSVRSWLDAHARDGRRIALSFAGVAGPVAGRDVAGIVLAVGEPTVEQRAAGATAG
VPRAGYLGLAGLTPDDEAALGDWLADADVPKAAHDVKAVLHALRSRGWSLAGLTSDTALA
AYLARPGQRTFDLADLALRYLRRELRTEEPADGQLSLLGGADEADAQAAQQEMLAASAIA
ELADALDTELAERGGTELLADLELPLAFVLADCEAAGIAVDSETLSDLESDFGGQVREAA
QNAYRVIGKEINLGSPKQLQVVLFDELEMPKTKRTKTGYTTDADALQSLYEQTGHEFLQF
LLQHRDATRLKVTVDGLIKSVADDGRIHTTYSQTIAATGRLSSTDPNLQNVPIRTAAGRR
IRDAFVVGTGPEGGAYAELMTADYSQIEMRIMAHLSEDEALIEAFRSQHDFHAETAARVF
GVEAAGVSVEQRAKIKAMNYGLAYGLSAYGLSGQLRISTDEAKGLMDDYFAGFGGVRDYL
AGVVDQARKDGYTATILGRRRYLPDLTSDNRQRREMAERMALNAPIQGSAADIIKVAMLG
VRRALSAEGLRSRMLLQVHDELVLEVADGERETCEALVRREMAAAADLSVPLEVSVGYGR
SWDAAAH
NT seq 2724 nt   +upstreamnt  +downstreamnt
ctgctgctcgacggtcactccctggcctaccgggcgttcttcgcgttgcccgcggagaac
ttccgcaccggcaccgggcagaccacgaacgcggtctacggcttcacctcgatgctgatc
aacctgctgcgcgacgaggagccgacgcacctggcggtggcgttcgacgtctcccggaag
acgttccgctccgagcggttcgccgactacaaggcgaaccggacgaccacgccggacgac
ttccgcggccagatcgacctcatcaaggaggtcctgggtgcgctgaacatcccggtgttc
gcggtcgacggcttcgaggccgacgacctcatcgccaccctcgcgacgcaggccgagggc
cagggcttccaggtgctcatcaccaccggcgaccgggacgcgttccagctggtcaccgag
gacgtcacggtgctctacccgaagcgcggcgtgtccgacctgggccggatcgacccggcc
gaggtcgacaagcgctacgggctgaccccgacccagtaccccgacttcgcggcgttgcgc
ggcgacccgtcggacaacctgccctcgatcccgggggtcggtgagaagacggcggcgaag
tgggtccgcgagttcggctcgctcgccgagctgaccgaccgggtcgacgaggtgaagggc
aaggcaggcgacaacctgcgggccaacctggccaacgtgctgctgaaccggcagctcacc
gagctggtccgcgacgtcgacctcggtgcgggcccggagcagctcgaggtgcgcgcctgg
gaccgcgacgcggtgcaccgcctgttcgacgagctcgagttccgggtgctgcgcgagcgc
ctgttctccacgctgtcgtcggccgagccggaggccgaggagggcttcgagatctccgcg
gaggtcgtcgagccggggtcggtgcggtcctggctcgacgcccacgcccgcgacgggcgg
cggatcgcgctgagcttcgccggggtcgccgggccggtcgcgggccgcgacgtcgcgggg
atcgtgctggcggtcggggagccgacggtcgagcagcgcgcggccggggcgacggcgggc
gtcccccgggccggctacctcggtctcgccggtctcaccccggacgacgaggccgcactc
ggcgactggctcgccgacgccgacgtgcccaaggccgcgcacgacgtgaaggccgtcctg
cacgcgctgcggtcccgcggctggtcgctggccgggctgaccagcgacaccgcgctcgcc
gcgtacctggcgcggccggggcagcggaccttcgacctggccgacctggcactgcgctac
ctgcgccgcgagctgcgcaccgaggagccggccgacgggcagctgtccctgctcggcggg
gccgacgaggcggacgcgcaggccgcgcagcaggagatgttggccgcgtcggcgatcgcc
gagctggccgacgccctcgacaccgagctcgccgagcggggcggcaccgagctcctcgcc
gacctggagctcccgctggcgttcgtcctcgccgactgcgaggcggccgggatcgcggtc
gactccgagacgctctcggacctggagtccgacttcggcggccaggtccgcgaggccgcg
cagaacgcgtaccgggtgatcggcaaggagatcaacctcgggtcgccgaagcagctccag
gtggtgctgttcgacgagctggagatgccgaagaccaagcgcaccaagaccggctacacc
accgacgcggacgcgctgcagagcctctacgagcagaccggtcacgagttcctgcagttc
ctgctgcagcaccgggacgcgacccggctgaaggtcaccgtcgacgggctgatcaagtcc
gtcgccgacgacggccgcatccacaccacctactcgcagacgatcgcggcgaccggccgg
ctctcgtcgaccgacccgaacctgcagaacgtgccgatccgcaccgcggccggccgccgc
atccgggacgcgttcgtcgtcgggaccgggccggagggcggggcctacgcggagctgatg
accgcggactacagccagatcgagatgcggatcatggcgcacctgtccgaggacgaggcg
ctgatcgaggccttccgctcgcagcacgacttccacgccgagaccgcggcccgggtgttc
ggcgtcgaggcggccggggtgtcggtcgagcagcgcgccaagatcaaggcgatgaactac
ggcctggcctacgggttgtcggcctacggcctgtccgggcagctgcggatctccaccgac
gaggccaagggcctgatggacgactacttcgccgggttcggcggggtgcgcgactacctg
gcgggcgtcgtcgaccaggcccgcaaggacggctacaccgcgaccatcctcggccgtcgc
cgctacctgcccgacctgaccagcgacaaccgccagcgccgggagatggccgagcggatg
gcgctcaacgcgccgatccagggcagtgccgcggacatcatcaaggtggcgatgctcggg
gtgcgccgggcactgtcggccgagggactgcggagccggatgctgctgcaggtccacgac
gagctcgtgctcgaggtggccgacggcgagcgcgagacctgcgaggcgctggtccggcgg
gagatggcggccgccgccgacctctcggtgccgctcgaggtgtcggtcggctacggccgc
agctgggacgccgccgcgcactga

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