KEGG   Pseudonocardia sp. EC080619-01: AD017_24415
Entry
AD017_24415       CDS       T04234                                 
Name
(GenBank) ATP-dependent DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
pecq  Pseudonocardia sp. EC080619-01
Pathway
pecq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pecq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AD017_24415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pecq03400]
    AD017_24415
Enzymes [BR:pecq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AD017_24415
DNA repair and recombination proteins [BR:pecq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AD017_24415
    RecFOR pathway proteins
     AD017_24415
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA TIP49 AAA_5 AAA_16 Mg_chelatase AAA_3 IstB_IS21 AAA_14 nSTAND3 RNA_helicase AAA_18 AAA_33 Zeta_toxin HTH_AsnC-type Rad17 Resolvase TsaE NTPase_1 Cytidylate_kin NPHP3_N NACHT DUF815
Other DBs
NCBI-ProteinID: ALL85006
UniProt: A0A0P0SKD1
LinkDB
Position
5199186..5200205
AA seq 339 aa
MDAVAQPGEADVEASLRPRSLDEFVGQPRVREQLELVLEGARRRGDPPDHILLSGPPGLG
KTSLAMIVAQELGASIRLTSGPALERAGDLAAMLSNLVPGDVLFIDEIHRTARPAEEMLY
LAMEDFRVDVVVGKGPGATSIPLDVAPFTLVGATTRAGSLTGPLRDRFGFTGHMEFYEDL
ELEHVLHRAAGILGIDLRADGAEEIAGRCRGTPRVANRLLRRVRDFAEVRADGVIHREVA
RAALAVYDVDELGLDRLDRAVLSALVRSFHGGPVGVSTLAVAVGEDAGTVEEVCEPYLVR
AGMLARTPRGRVATPLAWTHLGLTPPADAPAGHRIDPLF
NT seq 1020 nt   +upstreamnt  +downstreamnt
atcgacgccgtcgcgcagccgggggaggccgacgtcgaggcgtcgctgcgcccgcggtcg
ctggacgagttcgtcgggcagccgcgggtccgcgagcagctcgagctcgtgctggagggc
gcacgccgtcgcggcgacccaccggaccacatcctgctctccggtccgcccggcctcggc
aagaccagcctcgcgatgatcgtcgcccaggagctgggcgcctcgatccggctcacctcc
gggcccgcgctggaacgcgcgggcgatctcgcggcgatgctgtccaacctcgtgccgggc
gacgtcctgttcatcgacgagatccaccgcacggcccggcccgccgaggagatgctgtac
ctggcgatggaggacttccgggtcgacgtcgtcgtcggcaagggaccgggtgcgacgtcg
atcccgctcgacgtcgcccccttcaccctggtcggggccaccacgcgggccgggtcgctg
accgggccgttgcgcgaccggttcggcttcaccgggcacatggagttctacgaggacctc
gagctcgagcacgtcctgcaccgcgccgcggggatcctcggcatcgacctgcgtgccgac
ggtgcggaggagatcgccgggcgctgccggggcaccccgcgggtcgcgaaccggctgctg
cgccgggtgcgggacttcgcggaggtccgggccgacggcgtcatccaccgcgaggtcgcc
cgcgccgccctcgccgtctacgacgtcgacgagctcggcctcgaccgcctcgaccgcgcc
gtgctgtccgcgctggtccgctcgttccacggcgggccggtcggcgtctccacgctcgcc
gtcgcggtgggggaggacgcgggcaccgtcgaggaggtctgcgagccgtacctggtgcgg
gccgggatgctcgcccgcaccccgcgcggccgggtcgcgaccccgctcgcctggacgcac
ctcgggctcaccccgccggccgacgccccggccgggcaccgcatcgacccgctcttctga

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