Candidatus Phaeomarinobacter ectocarpi: BN1012_Phect1258
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Entry
BN1012_Phect1258 CDS
T09856
Name
(GenBank) Succinyl-CoA ligase [ADP-forming] beta chain
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
pect
Candidatus Phaeomarinobacter ectocarpi
Pathway
pect00020
Citrate cycle (TCA cycle)
pect00640
Propanoate metabolism
pect00660
C5-Branched dibasic acid metabolism
pect00720
Other carbon fixation pathways
pect01100
Metabolic pathways
pect01110
Biosynthesis of secondary metabolites
pect01120
Microbial metabolism in diverse environments
pect01200
Carbon metabolism
Module
pect_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pect_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pect00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BN1012_Phect1258
00640 Propanoate metabolism
BN1012_Phect1258
00660 C5-Branched dibasic acid metabolism
BN1012_Phect1258
09102 Energy metabolism
00720 Other carbon fixation pathways
BN1012_Phect1258
Enzymes [BR:
pect01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
BN1012_Phect1258
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
CPSase_L_D2
GARS_A
Motif
Other DBs
NCBI-ProteinID:
CDO59472
UniProt:
X5MCR7
LinkDB
All DBs
Position
complement(3010674..3011843)
Genome browser
AA seq
389 aa
AA seq
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MNIHEYQAKGVLGGFGVAVAQGKPAFSVDEAVKVAEDMGGPVWVVKAQIHAGGRGKGGGV
KVVKSIDEVRAEAERMLGMTLVTHQTGPEGKLVQRLYVEEGSDIDRELYLSLLVDRETSR
VAFVASTEGGMNIEEVAAETPEKIHTIDVDPASGFMPFHGRALAHALQLKGAEAKAGAKL
FKGLYDAFIGTDASLVEINPLVVTKGGDVLCLDAKMNFDSNALYRHKEIADLHDPAEEEA
AELEAAKYDLSYVKLDGTIGCMVNGAGLAMATMDIIKLYGEEPANFLDVGGGATKEKVTE
AFKIILSDPAVEGILVNIFGGIMRCDIIAEGVIAAAKETSLAVPLVVRLEGTNVELGKQI
MADSGLAIIPADNLADAAEKIVKAVKEAK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccacgagtatcaggccaaaggcgtgcttggtggcttcggcgttgccgttgcc
cagggcaagcccgccttctccgttgatgaagcggtcaaggttgcagaagacatgggcggc
cccgtttgggtcgtcaaagcgcaaatccacgcaggtgggcgtggcaagggcggcggtgtc
aaggtggtgaaatccatcgatgaagtccgcgccgaagccgaacgcatgctgggcatgacg
ctcgtgacacaccagaccggccccgagggcaagctggttcagcggctctacgtggaagaa
ggctccgacattgatcgtgagctctatctctcgctccttgttgatcgtgaaaccagccgg
gtggcctttgtggcgtcaaccgaaggtggcatgaacatcgaagaagtggcggctgagacg
cctgagaagatccacaccattgatgtggatccggcttccggcttcatgccgttccatggt
cgtgcacttgctcatgcgctgcagctcaagggcgcagaagccaaggcgggcgccaagctc
ttcaagggcctgtatgacgcgttcatcggcactgacgccagcctcgttgaaatcaaccct
ctggtggtcacaaagggcggcgacgttctttgcctcgacgccaagatgaacttcgactcc
aacgcgctgtaccggcacaaggaaattgcagacctgcatgaccctgccgaagaagaagca
gccgagcttgaagctgccaagtatgacctctcctacgtcaagctcgatggcaccattggc
tgcatggtcaacggcgcaggccttgccatggcgacgatggacatcatcaagctgtacggc
gaagagcctgccaacttcctggatgtgggtggcggcgccaccaaggagaaggtgacggaa
gccttcaagatcatcctgtctgaccctgcggttgaaggcattctggtcaacattttcggg
ggcatcatgcgctgcgatatcatcgcggaaggcgtgatcgccgctgccaaggagacatcg
cttgcggtgccgctcgttgtgcgccttgaaggcaccaatgttgagcttggcaagcagatc
atggccgatagcggccttgccattattcctgctgacaatctggcggatgccgccgagaag
atcgtcaaagccgtgaaggaggccaaatag
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