Candidatus Phaeomarinobacter ectocarpi: BN1012_Phect1456
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Entry
BN1012_Phect1456 CDS
T09856
Name
(GenBank) Pyridoxal-dependent decarboxylase
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
pect
Candidatus Phaeomarinobacter ectocarpi
Pathway
pect00600
Sphingolipid metabolism
pect01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pect00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
BN1012_Phect1456
Enzymes [BR:
pect01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
BN1012_Phect1456
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
DegT_DnrJ_EryC1
SepSecS
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
CDO59670
UniProt:
X5MLQ0
LinkDB
All DBs
Position
3190768..3192237
Genome browser
AA seq
489 aa
AA seq
DB search
MRMPAQGRTKEDVFAALEEFGTDDLDVHGGGTFAYIYDAGPDVDDVAKRAYTRYLTENAL
DPTVYPSLLRFENELVAMAIDHLQGDEEVVGNFTSGGTESCMLAVKTARDYFREKKPEIT
EPEIILPVTAHAAFQKAAQYLCLKPVLVPMDPVTYKADPKAIEDAITPNTIQIVASAVSY
AHGVIDPIEEIAAIAKKHDLLFHVDGCIGGFMLPYWRRLGEDVPPFSFEVDGVTSMSMDL
HKYAYCPKGASVILQRNKDLRRHQIFTCSSWTGYTVINPTILSTKTGGPMAAAWAVMNFL
GDEGYLSIADKMLQATKKIRAGIAAMPEYEILGDPELCLVAFTSDVMSIFPVIDEMKKRG
WFIQPQLGFFGSKENIHLSIDQASLTQADAMLKDLRECTDIVKAKNEEAVPADIKEFVKA
LTPDDFTPELFQEFMKMLGSTDSGELPDGTTEINELLNVMDPGVAKKALTEYMNELYVPP
QKSHSAAAE
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagaatgcccgcgcaaggccgcacaaaagaggatgtattcgccgcgctagaagagttc
ggcacggacgatctggacgtccatggaggcggcactttcgcctacatctacgatgcggga
cccgacgtcgatgacgtcgccaaacgggcttatacacgctacctgacagaaaacgcgctc
gaccccaccgtctatcccagcctgctgcggtttgaaaacgaactggtggccatggccata
gaccacttgcagggtgatgaggaggtcgtcggcaacttcacctcaggcgggacggaaagc
tgcatgcttgctgtcaaaaccgcgcgcgattatttccgcgagaagaagccggaaatcaca
gaaccggaaatcatcctgcctgtgaccgcccacgcggcttttcaaaaggcagcacaatat
ctgtgtctgaagcccgtcctcgtgccgatggacccggtaacctacaaggccgatcccaaa
gccatcgaagacgccattacgcccaacaccatccagattgtggcatctgcggtttcctat
gcccatggcgtcatcgacccgatcgaagagatcgcggcgatcgctaaaaagcatgacctg
ctcttccatgtggatggctgcatcggcggtttcatgctgccttactggcgccgtcttggc
gaagacgtgccgccattttcctttgaggtcgacggcgtcacatccatgtcaatggatctg
cacaaatacgcctactgccccaagggcgccagcgtcattctgcaacgcaacaaggacctg
cgccggcatcagatttttacctgttcaagctggacaggctacacggttatcaacccgaca
atcctttccaccaagacgggcggacccatggcggcagcgtgggcggttatgaacttcctg
ggtgacgaaggctacctctccatcgccgacaaaatgctgcaggccaccaagaagatccgg
gccgggattgctgccatgccggaatatgaaattctcggcgaccccgagctttgcctcgtg
gccttcacatcagatgtcatgagcatcttcccggtgattgatgaaatgaaaaagcgcggc
tggttcattcagcctcagctggggttctttggatcaaaggaaaacatccacctgtcgatt
gaccaagcgagccttacccaggctgacgccatgctgaaagacctgcgcgagtgcaccgac
atcgtgaaagcaaagaacgaagaggccgtgcccgccgacatcaaggaatttgtaaaagcg
ctgacaccagatgattttacgccggagctgtttcaagagttcatgaaaatgctcggctca
acggattcaggggaactgcctgacggcaccacggagatcaacgagctgctcaacgtcatg
gacccgggtgtggcaaaaaaagccctcacggagtacatgaacgaactttatgtcccaccg
caaaagagccattccgcagcggcggagtga
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