Candidatus Phaeomarinibacter ectocarpi: BN1012_Phect1830
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Entry
BN1012_Phect1830 CDS
T09856
Name
(GenBank) Integration host factor beta subunit
KO
K05788
integration host factor subunit beta
Organism
pect
Candidatus Phaeomarinibacter ectocarpi
Brite
KEGG Orthology (KO) [BR:
pect00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pect03032
]
BN1012_Phect1830
03036 Chromosome and associated proteins [BR:
pect03036
]
BN1012_Phect1830
03400 DNA repair and recombination proteins [BR:
pect03400
]
BN1012_Phect1830
DNA replication proteins [BR:
pect03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BN1012_Phect1830
Chromosome and associated proteins [BR:
pect03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BN1012_Phect1830
DNA repair and recombination proteins [BR:
pect03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BN1012_Phect1830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
CDO60043
UniProt:
X5M990
LinkDB
All DBs
Position
234878..235261
Genome browser
AA seq
127 aa
AA seq
DB search
MIKSELVQRLAQANPHLYQRDVERIVGTIFEEIAQALANGDRVELRGFGAFSVKTRPART
GRNPRTGEPVEVEAKSVPFFKTGKELRERLNRRPLGSDAALTEQPSEAGEPDNDDVQDLA
PNLAAGE
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgattaagtcagaactcgtacagcggttggcgcaggccaatccgcatctgtatcaacgc
gacgttgagcgcatcgtcggcacgatctttgaggagattgcgcaggcgctggccaatggc
gaccgtgtggaactgcgtggcttcggcgcgttttccgtcaagacacgcccggctcggacc
ggccgcaacccccgcaccggtgaaccggtggaagtggaagcgaagtccgtaccgttcttc
aagaccggcaaggaactgcgcgaacggctcaaccgccgcccgctgggctccgatgcggcg
ttgacggaacagccatcagaagccggtgagccggacaatgatgatgtgcaggacctggcc
cccaatctggctgccggcgaatag
DBGET
integrated database retrieval system
