Candidatus Phaeomarinobacter ectocarpi: BN1012_Phect1846
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Entry
BN1012_Phect1846 CDS
T09856
Name
(GenBank) FIG041266: ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pect
Candidatus Phaeomarinobacter ectocarpi
Brite
KEGG Orthology (KO) [BR:
pect00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pect03400
]
BN1012_Phect1846
Enzymes [BR:
pect01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BN1012_Phect1846
DNA repair and recombination proteins [BR:
pect03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BN1012_Phect1846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
CDO60059
UniProt:
X5MFQ5
LinkDB
All DBs
Position
complement(254290..257319)
Genome browser
AA seq
1009 aa
AA seq
DB search
MGQVFTIPPHVPFLPALAAGLLARGDALATTTVLVPTRRAARALVEALLEQSETDALLLP
DIRPLGDVDEDLGFGSTDAGDAPLTLPPAIEPMHRTLVLAQIIERHAEATGLTTMSQAQA
IALAGELAALMDTFAAQDVPLSRLQNVVHREFADHWKETLTFLEVITDIWPQMLATLGLM
DPARRRADLIKATCKRWQDTPPGAIVAAGSTGSLKATADMLKTIAGLDEGTVVLPGLDQQ
MDEAAWAACEPAHPQFGLKLLLSRIGMERNAVKVWSYGTSSNNAEARTRLVSEAQRPAET
TDQWKDADINLSPIIDDALTGLTMVSADNPQLESLSIALALREALETPGKTAALVTPDRN
LARRVASDLARWGIIVDDSGGQPLAHTRAGGFLLQVAEMLTEQLAPIEMLTALRHPLARG
GEEEGVFHGLVDLLDKQVLRGPRPAPGLDGMADAVEEAATRTYGPLNENEHARVRRLHQA
LTSFIGAPLEVMDAREVDAAALMEAHLTAAEALAATHEETGAHRLWSGASGEAASAFMAD
VMAQASLLGSISPADYPAILGALMTGRMVRPVRRSHARLQILGPLEARLQHADRLVLGGL
NEGVWPQRAETGAWINRPMRAQLGLEAPERLIGLAAHDVAQGLGTSDVILTRAERSDGQP
TVPSRWWLRLENLVGGLPVPGDDSKKQKRCIPSGPWLAMARALDRPVREARQIDRPAPTP
PVEARPARLSVTRINDLFRDPYAIYASHVLGLSVLDDLDADAGARDRGDIIHKILERFSL
EHPPTAKKPMPDNAYGELVAIAREEFDKTDARPAVQAIWYPRFLEVAEWFLTWEAARRTG
IKQTFVELKGEHTVTLPTRAFTLSGIADRIDLLSDGSLAILDYKTGTAPTAKQTAAGFSV
QLPLEAAMARDGAFHTDKSGKTIGPPRALTSELAYVELKTGKVVSAVDKKADVMTEADAA
MGHMVDLLTLFEEEETPYISRPRPQFLTYDGDYDHLARVKEWQTATDTD
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgggccaggtcttcaccattcccccgcacgtcccgttcctgcctgcccttgcggcgggg
ttgctggcgcgtggggatgcgctggccacaaccactgttctggtgcccacccgccgtgct
gcccgcgcccttgtggaagccctgctggagcaaagcgaaaccgacgctttgctgctgccg
gacattcgcccgctgggggacgtggacgaggaccttggctttggcagcactgacgcaggc
gacgcgccgctgaccctgccgcctgccattgagcccatgcaccgcacgctcgtgctggca
cagatcattgagcgtcacgccgaggcaaccggcctcaccaccatgagtcaggcacaggcc
attgccttggccggtgaactggcggccctgatggatacgttcgccgcgcaggatgtgccg
ctgagccgattgcagaacgtggtgcatcgtgagtttgcggaccactggaaagagaccctg
acattcctggaggtgattaccgacatctggccgcaaatgctcgcaacgcttggcctgatg
gacccggcgcgccgccgggccgacctcatcaaggccacgtgcaagcgctggcaggacacg
ccgccgggtgccatcgtcgctgcggggtccaccggttccctcaaggccacggctgacatg
ctcaagaccattgccggtcttgacgagggaaccgttgtgctgcccggcctcgaccagcag
atggacgaggcggcctgggcggcgtgtgaacccgcacacccgcaatttggcctcaaactc
ctgctgtcgcgcatcggcatggagcgcaacgctgtcaaagtctggtcttacggcacatcg
tcaaacaacgctgaagcgcgaacgcggctcgtgagtgaagcccagcggcctgcggaaacc
accgaccagtggaaagacgccgacatcaacctgtcgccgatcatcgacgacgccctcacc
ggtctcaccatggtgagtgcggacaacccgcagcttgaatccctgtcgatcgcccttgct
ttgcgtgaagcactggagacaccgggcaagaccgcggcccttgtgacacctgaccgaaat
ctcgcccgccgggttgccagtgatctggcgcgatggggcatcatcgtggatgacagtggc
ggccagccgctggctcatacgcgtgcaggcggtttcctgttgcaggtcgcggagatgctg
accgagcaattggcccccatcgagatgctgacggccctgcgccatcccctcgcgcgcggc
ggtgaggaagaaggcgtcttccatggattggtggacctgctggacaagcaggtcctgcgc
gggccgcgtcctgcgccgggtcttgacggcatggcggacgccgttgaggaagccgccacc
cgcacatatggcccgctcaatgaaaatgaacacgcgcgggtgcggcggctgcatcaggca
ctcacgtccttcattggcgcgccccttgaggtgatggatgcgcgcgaggttgatgctgcc
gcgctcatggaagcgcatctgactgccgcagaagcgctcgcggcaactcatgaggaaaca
ggtgcacaccgcttgtggtccggtgcatcgggcgaggccgcctctgccttcatggcggat
gtgatggcgcaggccagtctgctgggcagcatctcgcctgcggactatccggccattctt
ggcgcactcatgaccggccgcatggtgcggcccgtgcggcgctcccatgcgcggttgcaa
attctcggcccccttgaagcccgcctgcaacatgcggaccggctggtgctgggtgggctc
aatgaaggcgtgtggccgcagcgcgctgaaacaggcgcgtggatcaaccgccccatgcgc
gcgcagcttggcctcgaggcccctgagcgcctgatcggtcttgcggcccatgacgtggcg
caggggcttggtacgagcgacgtgatcctcacccgggcggagcgttcggatggtcagccc
acggtgccgtcgcgctggtggctgcggcttgaaaatctggtcggtggcctaccggtgccc
ggcgacgacagcaaaaagcaaaagcgctgcattccatccggcccgtggctcgccatggcg
cgggcgctggaccggcccgtgcgcgaggcccggcagattgatcgcccggcgcccacaccg
ccggtggaagcacggcctgcccgcctgtccgtcacccgcatcaatgatctgttccgcgac
ccttatgccatctatgccagccatgtgctggggctcagtgtgctggatgatctggatgcg
gatgctggcgcccgcgaccggggcgacatcatccacaagatcctcgaacggttttcgctg
gagcatccacccaccgcgaaaaaaccgatgccggacaatgcctatggtgagttggtcgcc
attgcgcgggaggaatttgacaagacggatgcccggcccgccgtgcaggccatctggtat
ccgcgctttttggaggttgcggagtggttcctcacctgggaagcggcaaggcggaccggc
atcaagcagacatttgtcgagctgaagggtgagcacacagtcacccttccaacgcgcgcg
tttaccctgagcggcattgccgaccggattgatctgctgagcgacgggtcgctggccatt
cttgattacaagaccggtacagcgccaaccgccaagcagaccgccgccgggttctccgtg
cagctgccgcttgaggccgccatggccagagacggcgcgttccacacggacaaaagtggc
aagaccatcggcccgcccagggcgctcacgagcgagctggcctatgtggaactcaagacc
ggcaaggtcgtaagtgctgtcgacaagaaggccgatgtgatgacggaggccgacgctgcc
atggggcacatggtggacctgctcaccctgtttgaagaggaagagacaccctacatctcg
cggccccggccgcagttcctgacctatgatggcgactatgaccatcttgcccgagtgaaa
gaatggcagacagcaaccgacaccgactag
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