Candidatus Phaeomarinibacter ectocarpi: BN1012_Phect1870
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Entry
BN1012_Phect1870 CDS
T09856
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pect
Candidatus Phaeomarinibacter ectocarpi
Pathway
pect03030
DNA replication
pect03410
Base excision repair
pect03420
Nucleotide excision repair
pect03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pect00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN1012_Phect1870
03410 Base excision repair
BN1012_Phect1870
03420 Nucleotide excision repair
BN1012_Phect1870
03440 Homologous recombination
BN1012_Phect1870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pect03032
]
BN1012_Phect1870
03400 DNA repair and recombination proteins [BR:
pect03400
]
BN1012_Phect1870
Enzymes [BR:
pect01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN1012_Phect1870
DNA replication proteins [BR:
pect03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BN1012_Phect1870
DNA repair and recombination proteins [BR:
pect03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BN1012_Phect1870
NER (nucleotide excision repair)
GGR (global genome repair) factors
BN1012_Phect1870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Taq-exonuc
HHH_2
Motif
Other DBs
NCBI-ProteinID:
CDO60083
UniProt:
X5M9B2
LinkDB
All DBs
Position
complement(281952..284861)
Genome browser
AA seq
969 aa
AA seq
DB search
MATKKTLGGGTPLTKNSHLYLVDGSAYLFRAYHALPPLTRKSDGLPVGAVSGFCNMLQKL
VLASKERGDRDAPTHFAVIFDAKGDTFRNEIYSDYKANRDAPPEDMVPQFPLVRDATRAF
SLPSIEMTGFEADDLIATYAKQAATLGAEVTIVSSDKDLMQLVDDKIEMLDPMKDKVIDS
DGVVEKFGVTPDKVVEVQALAGDSSDNVPGVPGIGIKTAALLINEFGDLENLLANAESIK
QKKRRENLIEFAEQARISRRLVLLDQDVPVDVPLDDMAVVEPDAKKLIGFLKDMEFNTLT
RRMAEMLDADADAIEAAGDHKSEAKPKAAPSVEAGEAGGTPGAMDPAYADNPPIEETEYD
CVTTIEALDEWIAEAYATGLIGLDTETTSLDPMSGSLVGISLATKPGRACYIPLTHGMAS
EGTLALDDPAPEQIPVKDAIARLKPLLEDSGVMKVLQNAKYDLVILKRAGIDVYPIDDTM
LISYALDTGLHSHGMDALSQRFLEHTPIPFKEVAGTGKAQITFDKVSLDKATRYAAEDAD
VTLRLYHVLKPRLVGERMMTVYETLERPMVGVLQQMEMAGIKLDPAILKRMSSDFAQKLA
GLEAEIHELAGEEFNIGSPKQLGEILFDKMGIEGGKKTKTGAWGTGADVLETLAAQGHDL
PIRVLEWRQLSKLKSTYTDALPDFINEETGRVHTSYSLASTTTGRLSSSDPNLQNIPIRT
EEGRKIRTAFVADDGNVLISADYSQIELRVLAHMAGIDTLRQAFADGLDIHAMTASEMFN
EPIEGMDPMIRRKAKAINFGIIYGISAFGLANQLSIPRGEAAEYIDKYFERFPGIRAYMD
ETKAYAREHGFVSTLFGRKTHLPEIASKNGAQRSFTERAAINAPIQGSAADIIRRAMIRM
PEALEKAKLPAKMLLQVHDELIFEVPEKQADKTIKVVREVMEGAAAPAVNLSVPLVVDAN
AALSWAEAH
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
gtggcaactaagaagacattgggcggcggaacgcccctcaccaagaacagccatctttat
ctggtggatgggtctgcctatctgtttcgggcgtatcacgcgctgccgccgctgacgcgc
aagtctgacgggctgccggtgggggctgtgtcgggcttttgcaacatgctgcagaagctg
gtgctggcatccaaggagcgcggcgaccgggatgcgccaacgcattttgcggtgatcttt
gacgccaagggcgacacgttccgcaacgaaatctattcagactacaaagccaaccgcgat
gcgccgcccgaagacatggtgccgcagtttccactggtgcgcgatgcaactcgtgccttc
agtctgccctccatcgagatgaccggctttgaggccgatgatctgattgcgacctatgcc
aagcaagcagcgacgctgggtgccgaagtcaccatcgtctcgtccgacaaggacctgatg
cagctggttgatgacaagatcgagatgctggacccgatgaaggacaaggtcatcgacagt
gatggggtcgttgaaaagttcggtgtgacgccggacaaggtcgtggaagtgcaggcgctg
gcgggggactcgtcagataatgtgccgggggttccaggcatcggtatcaagacggccgcg
ctgctcatcaacgagtttggcgaccttgaaaacctgctcgccaatgcggaaagcatcaaa
cagaagaagcgccgggagaacctcatcgagtttgcagagcaggcgcgcatctcgcgccgg
cttgtgctgctggaccaggacgtgccggtggatgtgccgctggatgatatggcggttgtt
gagccggacgccaaaaagctcatcggctttttgaaggacatggagttcaacaccctgacg
cgccgcatggcagaaatgctggatgcagacgcggatgccattgaagctgcgggtgatcat
aagtccgaggcaaaaccgaaggctgctccgtcggtggaggctggcgaggccggcggtacg
cccggcgccatggacccggcctatgcggacaacccacccatcgaagagaccgagtatgac
tgcgtcacaacgattgaggcactggacgagtggattgcggaggcatacgcgacggggttg
atcgggcttgatacggaaaccacctcgctggatcccatgtcaggctcgcttgtgggcatc
tcgctggccacgaagcccgggcgtgcctgctacattcccctcacccacggcatggcgagc
gaaggcacactggcgctggatgatccggctccggagcaaattccagtgaaggacgctatc
gcgcggctgaaaccactgctggaagacagcggcgtaatgaaagtgctgcagaacgccaag
tatgaccttgtcatcctcaagcgcgcgggcattgacgtttatccgatcgacgacaccatg
ctgatttcctacgcgctggataccggtctgcacagccatggcatggatgcgctgtcgcag
cggttccttgagcacacacccattcccttcaaggaagtggcgggcacgggcaaggcgcag
atcaccttcgacaaggtgtccctcgacaaggcgacccgctatgccgccgaagacgcggat
gtgacgctcaggctctatcacgtgctgaaaccgcgccttgtgggcgagcggatgatgacc
gtttacgagacgctggagcggccgatggtcggcgtgctgcagcagatggaaatggcgggc
atcaagctggacccggccatcctcaagcgcatgtccagtgactttgcgcagaaacttgca
ggccttgaagctgaaatccacgagctggcaggcgaagaattcaacatcggcagcccgaag
cagctgggtgaaatcctgttcgacaagatgggcattgaaggcggcaagaagaccaagaca
ggcgcctggggcaccggcgcggatgttctcgaaacgctggcggcgcagggacatgacctg
ccgatccgcgtcctggaatggcggcagctgtccaaactcaaaagcacctacaccgatgcg
ctgcctgacttcatcaacgaagaaacagggcgagtgcatacgagttactcgctggcctcc
accacgacggggcggctgtcatcgtctgacccgaacctccagaacattcccattcgcacc
gaagaaggccgcaagatccgcaccgccttcgtggctgacgacggtaacgtgctgatctcg
gctgactacagccagatcgaactgcgggtgcttgcacatatggccggcattgatacgctg
cggcaggcctttgcggacgggctggacattcacgccatgacggcaagtgaaatgttcaac
gagcccattgaaggcatggacccgatgatccgccgcaaggcgaaggcgatcaacttcggc
atcatctacggcatttcagcgttcgggctggcgaaccagctgtccattccccgcggcgag
gcggcggagtatatcgacaagtactttgagcgcttcccgggtattcgcgcctacatggat
gaaaccaaggcctatgcgcgcgagcatggttttgtgtcgacgttgttcggccgcaagacg
catctgccggaaattgcctccaagaatggcgcgcagcgctcgttcacagaacgggccgcc
atcaatgcaccgatccaggggtcagcggctgacatcatccgtagggcgatgatccgtatg
ccggaagctcttgagaaagccaaactgcctgccaagatgctgcttcaggtgcacgatgaa
ctgattttcgaagtgcctgaaaagcaggcggacaaaaccatcaaggttgtgcgtgaggtg
atggaaggtgcggcagcgccagccgtcaatctctctgtgccactggtggtggatgccaat
gcggcgttaagctgggcggaagcgcattag
DBGET
integrated database retrieval system
