Candidatus Phaeomarinibacter ectocarpi: BN1012_Phect2107
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Entry
BN1012_Phect2107 CDS
T09856
Name
(GenBank) ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1)
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pect
Candidatus Phaeomarinibacter ectocarpi
Pathway
pect02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pect00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BN1012_Phect2107
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pect02000
]
BN1012_Phect2107
Transporters [BR:
pect02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BN1012_Phect2107
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
DUF7673
Motif
Other DBs
NCBI-ProteinID:
CDO60320
UniProt:
X5MME1
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All DBs
Position
complement(528849..529862)
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AA seq
337 aa
AA seq
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MAGFVSTAHAQVKLLTYEGAWGDALAAAASASPDLPVIVERYDGSLNAAASTASLVDAET
DAANLMCDDGPAQPLNPELAQAFPPSLTLDVTHQCGVGYLVTSLVLTTRSDGPDSWAAFF
DAESFPGARALPRGARGTLEIALMADGIALGDVYALLETPEGVTRALDKLDALFAQAQIV
FWDTPDDAVALLRADAVAAAALPSVHAAHIVQQQPDASSAFQISFAGQIYRVQRLVVFPA
ATSDQETVRRLLNAVLSETGQALLAEALLAGPVNPQAWRNIPASLAPLLPTAQSHNIAVT
GLADNADFWADHGDDIEARFATWLDVHEQGQSPALPH
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtttcgtgagcaccgcgcatgcgcaagtcaagctgctgacctatgaaggcgcc
tggggcgatgccctcgcagcggcggcctcggcgtcgccggacctgccggtgatcgtcgaa
cggtatgacgggtcgctgaatgctgccgccagcacggcctcactcgtggatgcggagacg
gatgcggccaaccttatgtgtgacgatggcccggcacagccgcttaatcctgagcttgcc
caggcctttcccccctcactgacactggatgtgacgcatcaatgcggcgttggatatctg
gtgacgtcgctggtgctgacgactcgatcagacggcccggacagttgggctgcctttttt
gatgcagagagctttcccggtgcgcgcgcactgccgcgcggggcgcggggcacactggaa
atcgccttgatggccgacgggatcgcgctgggtgatgtgtacgccttgctggaaacacca
gagggcgtcacccgcgctctggacaagctggacgctctgtttgcccaggcccagatcgtg
ttctgggatacaccggacgatgccgtggcgcttttgcgggcagacgctgttgctgccgcg
gccctcccatcggtccacgcagcccacattgttcagcagcagccggacgcgtcctcagcc
ttccagatttcgtttgcagggcagatatatcgggtgcagaggcttgttgtcttcccggcc
gctacatctgaccaggagactgtgcgtcgcctgctcaacgcggtgctttcagaaacgggg
caggctttgctggcggaggcattgcttgcagggccggtcaatccgcaagcatggcgcaac
attcctgcctctcttgcacccttgctgcccacagcgcagtcgcacaacatcgctgttacc
ggactggccgacaatgcggacttctgggcagaccatggcgacgacattgaagcccggttc
gccacatggctcgacgttcatgaacagggccagtcgcctgccctgccccattga
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