Candidatus Phaeomarinibacter ectocarpi: BN1012_Phect2111
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Entry
BN1012_Phect2111 CDS
T09856
Name
(GenBank) Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1)
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pect
Candidatus Phaeomarinibacter ectocarpi
Pathway
pect02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pect00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BN1012_Phect2111
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pect02000
]
BN1012_Phect2111
Transporters [BR:
pect02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BN1012_Phect2111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
TOBE
nSTAND_NTPase5
AAA_25
nSTAND3
AAA_22
AAA_29
Arginosuc_syn_C
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
CDO60324
UniProt:
X5MG20
LinkDB
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Position
complement(533356..534540)
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AA seq
394 aa
AA seq
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MDTETLPDTATPDASTDGSIADPLVRFRGVQKTYDGETLVVKGLDLDIARGEFLTLLGPS
GSGKTTCLMMLAGFEMPTGGDILLDGDPITTLPPHKRDIGMVFQNYALFPHMSVAENLAF
PLKVRGMAPGVIATKVADALDMVELEDFGGRMPAQLSGGQQQRVAVARALVFEPKLVLMD
EPLGALDRMLREQMQLEIKHLHESLGITIVYVTHDQGEALTMSDRIAVFNDGVIQQVDPP
ARLYEEPQNSFVASFIGESNRLAGEIRGTVSGKVTVALDGSNGLVLAAPVAVRDTGARTL
LSIRPERVHVLSPGDTASYDNVFEGTVRELIYLGDHVRARLTLGGNDDFVVKVPNMAGSA
PLARGDTVRVGWSADDAHALDYMEFETDGPRAAA
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgagacgctgcctgacaccgcgacaccggacgcaagcaccgacggcagcatt
gctgatccactggtgcgctttcgcggcgttcaaaagacctatgacggcgaaacgctggtg
gtcaaaggtctggaccttgatattgcccgcggtgagtttctcaccctgctggggccatcg
ggctcgggcaagacaacctgcctgatgatgcttgcaggctttgaaatgcccacgggcggc
gacattcttttggatggcgatcccatcaccacgctgccaccgcacaagcgcgatatcggc
atggtgtttcagaactacgccctgtttccccacatgtcggtcgcagaaaatcttgctttc
cccttgaaggtccgcggcatggcgcccggtgtgattgcaacaaaggttgcggatgccttg
gacatggtggaactggaagatttcggtggtcgtatgcccgcgcagctgtccggtggtcag
caacagcgtgtggccgttgcccgcgccctggtgtttgaacccaagcttgtgttgatggat
gagccgctgggtgcccttgaccgcatgctgcgcgaacagatgcagctggagatcaagcac
ctgcatgagagcctcggcatcaccattgtttatgtgacccatgatcagggcgaagcgctg
accatgtctgaccgcatcgccgtcttcaatgacggggtcatccagcaggttgacccgcct
gcccgcctttacgaagaaccacagaacagttttgtggcgtcgttcattggcgagagcaac
cgactggccggtgagatacgcggcacggtgagcggcaaggtgacggttgccttggacggg
tccaacgggctggtgctggctgcccctgtggcggtccgtgacaccggcgcgcgcaccctg
ctgtccattcggccagaacgggtgcacgttctaagccccggtgacacagcgtcttatgac
aatgtgtttgagggcacggttcgggagctgatttacctgggggaccatgtgcgtgcccgc
ctgacacttggcggcaatgatgattttgtggtcaaggtgccaaacatggcaggctcagcg
cctcttgcgcgcggcgacacagtgcgtgtcggctggtctgcggatgatgcgcacgcgctg
gactacatggaatttgagaccgatggcccaagggccgccgcctag
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