Candidatus Phaeomarinibacter ectocarpi: BN1012_Phect2174
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Entry
BN1012_Phect2174 CDS
T09856
Name
(GenBank) Ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pect
Candidatus Phaeomarinibacter ectocarpi
Brite
KEGG Orthology (KO) [BR:
pect00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pect03009
]
BN1012_Phect2174
Enzymes [BR:
pect01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
BN1012_Phect2174
Ribosome biogenesis [BR:
pect03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BN1012_Phect2174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
CDO60387
UniProt:
X5MDQ6
LinkDB
All DBs
Position
complement(602032..603174)
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AA seq
380 aa
AA seq
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MSDTSSKNHLEFPTGGERIAKYLARAGVCSRRDAEKLIEEGRVEVDGIRLTTPAFKVASG
NVIRVNGAEVQKPEATRVWRYHKPQGLVTTAKDPEGRPTVFEKLPSDLPRVISVGRLDIA
SEGLLLLTNDGELARQLELPATGWLRRYRVRVRGKVHDGIISKLRSGIEVDGIKYGEINV
TRDEQSSGGANQWLTIGLREGKNREIRRVLAAVDVEVSRLIRLSYGPFELADLPAGLVQE
VPERVLKDQMGRGPKTEMAEDGSVKRAPRAPKPGGWAKAKPKDKLKDKARDKTKDKAGHK
GRGKFKDRASERTAGKTIERAGGKSFSGKPGGRPAAAKGSSGKAGPRLSGGKPSGGNPSR
GGPARPKTSGKPNANRRRNP
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacttcttccaagaaccatcttgaatttccgaccggcggcgagcggattgcc
aaatatctggcccgcgcgggcgtgtgttcgcgccgcgatgctgaaaagctgatcgaggaa
ggccgcgtggaggtggatggcatccgcctcaccacccccgccttcaaggtcgccagcggc
aatgtcattcgggtgaatggcgcggaagtgcaaaagcccgaggcgacgcgcgtctggcgt
taccacaagccgcagggcctggtgaccaccgccaaggatcctgaaggccgcccgacggtg
tttgaaaagctgccgtcggatttgccgcgggtcatttccgtgggccgcctggatattgcg
tccgaaggcctgttgctgctgaccaatgacggcgaactggcgcggcagcttgaactaccc
gccaccggctggctgcgccgctaccgtgtgcgggtgcgcggcaaggtccatgacggtatc
atttcaaagctgcgctccggcattgaagtcgacggcatcaaatatggcgagatcaacgtc
acccgtgacgagcaatcctccggcggcgccaatcagtggctcaccattggtctacgcgaa
ggcaagaaccgcgaaatccgccgcgtgctggcggcggtcgatgtggaagtcagccggttg
atccgtctgtcctatggcccgtttgagctggcggacctccctgcaggtctggtgcaggaa
gtccccgaacgcgtcctcaaggaccagatgggccggggtcccaagaccgaaatggcggaa
gacggcagcgtcaaacgtgcaccgcgcgcgccaaagcccggtggatgggccaaggcaaag
ccaaaggacaagctcaaagacaaggcgagagacaaaacaaaggacaaggccgggcacaaa
ggccgcggcaagttcaaggaccgcgcgtcggagcgtactgccggcaagaccatagagcgc
gcgggtggcaagtcgttttccggcaagccggggggcagaccagccgcagccaagggcagt
tccggcaaggctgggccgcgcctatccggtggaaaaccatcaggcggaaatccctcccgt
gggggccctgcacgtccgaaaacttcaggaaagccaaatgcgaatcgtcggcggaaccca
taa
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