Candidatus Phaeomarinobacter ectocarpi: BN1012_Phect2310
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Entry
BN1012_Phect2310 CDS
T09856
Name
(GenBank) TsaC protein (YrdC-Sua5 domains) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
pect
Candidatus Phaeomarinobacter ectocarpi
Brite
KEGG Orthology (KO) [BR:
pect00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pect03009
]
BN1012_Phect2310
03016 Transfer RNA biogenesis [BR:
pect03016
]
BN1012_Phect2310
Enzymes [BR:
pect01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
BN1012_Phect2310
Ribosome biogenesis [BR:
pect03009
]
Prokaryotic type
Other maturation factors
BN1012_Phect2310
Transfer RNA biogenesis [BR:
pect03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
BN1012_Phect2310
Prokaryotic type
BN1012_Phect2310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
Sua5_C
Motif
Other DBs
NCBI-ProteinID:
CDO60523
UniProt:
X5M9Z7
LinkDB
All DBs
Position
complement(732494..733612)
Genome browser
AA seq
372 aa
AA seq
DB search
MGGRSCGFSHLGNRGRVIRQTDSRNGGHIQPQGIYAAFALLKTGRSWQVAAMTPPAALTP
TKADKDAIDRASQCLLAGGLVAFPTETVYGLGADATSDRAVARIFEAKGRPQFNPLISHV
SGVEMARQLGELSDLALALADTFWPGPLTLVVPRSADCPVSLLASAGLDTIAIRMPNHKV
AQALIGRVQRPLAAPSANPSGRVSPTTAQHAADGLKGRIDMVLDGGPCTVGLESTVVSIV
ADQVRLLRPGTITRNQLEGVCGALEETKSNAIEAPGMLVSHYAPNASVRLNVSAPADNEA
LLGFGPDLPQHDGPIANLSPSADLVEAAANLFAMLRQLDATGARGIAVTPIPADGIGEAI
NDRLKRAAAPKT
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
gtgggcggtaggtcatgcggtttctctcatctcggcaatcgaggaagggtcattaggcaa
acagatagcagaaatggcgggcatatccagccgcagggtatttatgccgcttttgcgctt
ttgaagacgggtcggtcgtggcaggttgccgccatgacaccccctgccgccctcacccca
accaaggctgacaaagacgcgatcgaccgcgcgtcccagtgcctgcttgcgggggggctt
gtcgcttttccgaccgagacggtttacgggcttggcgctgacgcaaccagcgaccgggcg
gtggctcggatttttgaggccaagggccggcctcagttcaacccgcttatcagccatgtg
tcgggcgtcgagatggcccggcaactcggcgagttgagcgacctggcattggcgctcgcc
gataccttctggccggggccattgacgcttgtggtgccccgatctgccgattgtcccgtg
tcactgctggcctctgcggggctggataccatcgccatacgcatgccgaaccataaggtg
gcacaagcactgatcggacgtgtccaaaggccgttggctgcgcccagcgccaatccgtcc
ggtcgggtaagccctacgaccgcacagcatgcagcagatggcctcaagggcaggatcgac
atggtccttgatggaggcccgtgcactgttgggcttgaatctacggttgtttcaattgtg
gccgatcaagtacgcctgctccgacccgggaccattacccgtaaccagctggaaggcgta
tgcggggcgctagaggaaacaaagagtaacgcgattgaggcaccggggatgctggtaagt
cactatgcgccgaacgcatccgtgcgactcaatgtatcagcgcctgccgacaatgaggct
cttttgggttttgggccggatttgcctcaacacgatggcccgattgcgaatctgagccct
tcggctgatctggttgaggcggctgccaatctctttgccatgctgcggcagcttgatgcg
acaggcgcgcgcggcattgccgtgacgcccattccagctgatggcattggtgaggccata
aacgatcggctcaaaagggcggccgcgcccaaaacctga
DBGET
integrated database retrieval system
