Candidatus Phaeomarinibacter ectocarpi: BN1012_Phect2885
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Entry
BN1012_Phect2885 CDS
T09856
Name
(GenBank) DNA polymerase III delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pect
Candidatus Phaeomarinibacter ectocarpi
Pathway
pect03030
DNA replication
pect03430
Mismatch repair
pect03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pect00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN1012_Phect2885
03430 Mismatch repair
BN1012_Phect2885
03440 Homologous recombination
BN1012_Phect2885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pect03032
]
BN1012_Phect2885
03400 DNA repair and recombination proteins [BR:
pect03400
]
BN1012_Phect2885
Enzymes [BR:
pect01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN1012_Phect2885
DNA replication proteins [BR:
pect03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BN1012_Phect2885
DNA repair and recombination proteins [BR:
pect03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BN1012_Phect2885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
Mg_chelatase
nSTAND3
AAA_19
AAA_22
NACHT
AAA_24
AAA_14
Motif
Other DBs
NCBI-ProteinID:
CDO61097
UniProt:
X5MER4
LinkDB
All DBs
Position
complement(1347939..1348982)
Genome browser
AA seq
347 aa
AA seq
DB search
MLYGHQPAEDALREAFMAGRLHHAWLITGPAGIGKATLAYRFARFLLKYGDPRIVESAGV
ETLHIPPEDEVFKRVSSRGHANVLTLRKPWNDKTKKYMTVLSVDEVRRTHDFFGMKAGEG
GWRICIVDSADDMNTSSANALLKVLEEPPAQTIFLVLANHPGRLLPTIRSRCRTLPLKPL
SHDQLLSAVHGHLGHMADGDMEAVAKLAQGSVGRALLLAGGGGIELYREMHGVIASLPKP
DVPAVHALAEKLARRGNDQAYEMFRELLSDWLVRLVRQGAGGPAMIDEVIAGEADIMNRL
AAGASLDRWVEVWENTARTAERAEALNLDRKQVVLGTFAALETAARG
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgctgtatggccaccagccagctgaagacgcactgcgcgaagctttcatggcaggcaga
cttcaccatgcatggctgatcacagggcccgcgggcattggcaaggcaacactggcctat
cggttcgcccggtttctgctcaaatatggtgacccgcgaattgttgaatccgctggagtt
gagacgctgcacattcccccggaggacgaagtcttcaaaagggtatcgtcacgcggtcat
gccaatgtgttgacgctgcgcaagccctggaacgacaagaccaagaaatacatgaccgtg
ctttctgtcgatgaagttcggcggacgcatgactttttcggcatgaaggccggcgagggc
ggctggcgcatttgtattgtcgacagtgccgatgacatgaacacgagttccgccaatgcg
ttgctcaaggttcttgaggaacctccggcccagaccatttttctggttctcgcaaaccat
cccgggcggttgctgccaaccatcaggtcgcgatgccgcacgcttccgttgaagccgctc
agtcatgatcagctgctgtcagcggttcatggacatctgggacacatggcggacggggat
atggaagctgtggccaagctggcgcaaggcagcgttggacgggcgctcctgctggcgggc
ggcgggggcatagagctctaccgcgagatgcatggcgtgattgcaagccttcccaagccg
gatgtcccggcggttcatgccctggctgaaaagctggcgcgacggggcaacgaccaggcc
tatgagatgttccgcgagctgttgtctgactggctcgtgaggctggttcggcaaggcgcc
ggtggaccagcaatgattgacgaggtgattgccggtgaagctgacatcatgaaccgactt
gcagcgggtgcgtcgcttgatcggtgggtggaggtatgggaaaacaccgcccgcactgcc
gagagggcagaagcacttaatctcgaccgaaaacaggtggttctcggcacgtttgcagca
cttgaaactgcggcgcgcgggtag
DBGET
integrated database retrieval system
