Candidatus Phaeomarinibacter ectocarpi: BN1012_Phect2978
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Entry
BN1012_Phect2978 CDS
T09856
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pect
Candidatus Phaeomarinibacter ectocarpi
Brite
KEGG Orthology (KO) [BR:
pect00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pect03032
]
BN1012_Phect2978
03400 DNA repair and recombination proteins [BR:
pect03400
]
BN1012_Phect2978
Enzymes [BR:
pect01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BN1012_Phect2978
DNA replication proteins [BR:
pect03032
]
Prokaryotic type
DNA Topoisomerases
BN1012_Phect2978
DNA repair and recombination proteins [BR:
pect03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BN1012_Phect2978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF2835
Motif
Other DBs
NCBI-ProteinID:
CDO61190
UniProt:
X5MNE0
LinkDB
All DBs
Position
complement(1448800..1451682)
Genome browser
AA seq
960 aa
AA seq
DB search
MSDIDDNEPVEDPVTSEGAGDGAGGEPPAGGSDGPSDGPGEGIGRISIEDEMRSSYLDYA
MSVIVSRALPDARDGLKPVHRRILFSMNENGYDWNKPYRKSARVVGDVIGKYHPHGDQSI
YDALVRMAQDFSLRLPLLDGQGNFGSVDGDPPAAMRYTEVRMGKPAHALLEDIDKDTVDF
QNNYDDSEREPVVLPARFPNLLVNGAGGIAVGMATNIPPHNLGEVVDACIATLDTPTIGI
DDLMQIVPGPDFPTGGMILGRSGINTAYRDGRGSVVMRGKVHIEQTRGDREAIVITEIPY
QVNKSSMVEKIAELVREKRVEGISDLRDESDRDGMRVVVELKRDAVSDVVLNQLYRFSQL
QTSFGCNMIALNGGRPEVLTLKGFIDAFLAFREDVVTRRTKFELNKARDRAHVLVGLAIA
VANIDEVIRLIRSAPDPATARQQLMDRDWPAADVAPLVQLIADPRHVLTDGNTLRMSEEQ
ARAILDLRLQRLTALGRDEVGDELKGLGEKIEDYLETLRSKEKLSGIIRDELQAVRDEFA
TPRRTEIMESLGDFEDEDLIQREEMVVTVSHGGYIKRVPLDTYRAQRRGGKGRSGMATKD
EDFVSSIFVANTHTPILFFSSEGMVYRLKVWRLPAGSPQSRGKAMVNLLPLKEGERITTV
MPMPEDEESWGDQQLMFATRKGNVRRNQLSDFVRINVSGKIAMKLDDPEDGILGVAICTE
DEDVLLTTAKGRAIRFPATDVRVFTGRTSTGVRGIRLDDDDDVIAMAMLHHTGATPAEAR
AYLKQAKVMRAAVDDDAPVEEADDAADESGDDVTLSPERYAELGAHEQFVLAVSVNGFGK
RTSSYEYRTSGRGGKGIIAMTVTPRNGKLVAVFPVDEADQIMLVTDAGQLIRCPVNDVRV
AGRATQGVTIFRTADEESVVSVSHIADASNDDEDETAGNDDDGSSDNDDTPTLDEPGSDG
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagatatcgacgacaacgaacccgtggaagatcccgtaacatccgaaggcgccggt
gacggcgctggaggagagccgcctgcgggtggctcagatggaccttccgatggccccggt
gaaggcataggccgcatctcaatcgaagatgagatgcgcagttcttatctcgactatgcc
atgagcgtgatcgtgtcgcgtgcgctgcctgacgcccgtgacggcctcaaacctgtgcac
cgccgcattctgttttcgatgaatgagaacggctacgactggaacaagccgtaccgtaaa
tctgcccgtgtcgtcggtgatgtgattggtaagtatcacccgcacggggaccaatcgatc
tatgacgcgctggtgcgtatggcgcaggacttttccctgcgcctgccgctgctggacggg
cagggcaattttggctctgttgacggcgatcccccggcagccatgcgttacaccgaagtg
cggatgggcaagccggcccacgcactgctggaagatatcgacaaggatacggtcgatttc
cagaacaactatgatgacagcgagcgcgagccggttgtgctgcccgcacgctttccaaac
ctgctggtcaatggtgccggcggcattgccgtcggcatggcgaccaacattccgccgcac
aatcttggcgaagtggtcgacgcctgcattgcaacgctggatacgccgacaatcggcatt
gatgacctgatgcagatcgtgccgggtccggattttccgaccggcggcatgatccttggc
cgctccggcatcaacacggcctatcgtgatggccgcggctctgtcgtcatgcgcggcaag
gttcacattgaacagacacgcggtgatcgcgaagccatcgtcatcaccgaaattccctat
caggtgaacaagtcgtcgatggtggagaagattgccgagctggtgcgcgaaaagcgcgtc
gaaggtatttctgatctacgcgatgaaagtgaccgcgacggcatgcgtgtcgtcgtcgaa
ctgaagcgggatgcggtctcggacgttgtcctgaaccagctctatcgcttctcacagctt
cagacgtcctttggctgcaacatgattgcgctgaatggcggtcggccggaagtgctgacc
ctcaaggggttcattgatgcgtttctcgcgttccgcgaggacgttgttacccgccggacc
aagttcgagctcaacaaggcccgcgaccgtgcgcacgtgctggttggcctggccattgcc
gttgccaacatcgacgaagtcattcgtctgatccgcagcgcaccggacccggcaacggcc
cgccagcaattgatggatcgcgactggccggccgctgatgtggcgccgctggtgcaactc
attgcggacccgcgccacgtgctgacggacggcaatacgctgcgcatgagcgaggaacag
gcccgtgccattcttgacctgcgcctgcaacgcctgacagcccttggccgtgacgaggtc
ggcgatgagctcaagggtcttggtgaaaagatcgaggattatctcgagacgctgcgatca
aaagagaaactctccggcatcatccgcgacgagctacaggcggtgcgcgacgagtttgcg
acgccgcgccggacggaaatcatggagtccctgggcgacttcgaagacgaagacctgatc
cagcgtgaagagatggtggtgaccgtttctcacggtggctacatcaagcgcgtgccgctg
gatacctatcgggcgcagcgccggggcggcaagggccgttcgggcatggcgacgaaggat
gaggatttcgtcagcagcatttttgttgccaatacgcatacgcccatcttgttcttctct
tcggagggcatggtctatcgcctgaaggtctggcgtttgcctgcgggctcgccgcagtcg
cgcggcaaggcaatggtcaatctgctgccgctgaaagaaggcgagcgcattaccaccgtc
atgccgatgcctgaggatgaagaaagctggggcgaccagcagctgatgttcgccacccgc
aagggcaatgtgcggcgcaatcagctctctgatttcgtccgcatcaatgtcagcggcaag
attgccatgaagctggacgatcctgaggacggcatcctgggtgttgccatctgcactgaa
gatgaagacgttctgctgaccacggcaaagggcagggcgatccgcttcccggcgacggat
gtgcgtgtgttcaccggacgcacgtcaaccggtgtccgcggcatccggctcgacgacgat
gacgacgtgattgccatggctatgttgcatcataccggcgccacaccagctgaggcgcgg
gcctatctgaagcaggccaaagtcatgcgcgcggcggtggatgatgacgcgcctgtggaa
gaagccgacgacgccgcggacgagtcgggcgatgacgtcacactgtcacctgagcgatac
gcggaacttggcgcgcatgaacaattcgtgcttgcggtatcggtcaacggctttggcaaa
cgcacgtcctcctacgagtaccgaacgtcgggtcgtggcggcaaaggcatcattgccatg
acggtgacgccgcgtaacggcaagctggtggcggtgttccctgtggatgaagcagaccag
atcatgcttgtgacagatgccgggcagctcatccgctgcccggtcaatgacgtgcgtgtg
gccggacgggcgacccagggtgtcaccattttccgcacggctgatgaagagagcgtggtg
tcagtttcccacatcgcagacgcttcaaacgatgatgaagacgaaacagccggtaacgat
gatgacggatcgtcagataatgacgacacgccaaccctcgacgaaccgggttctgacggc
taa
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