Candidatus Phaeomarinibacter ectocarpi: BN1012_Phect3138
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Entry
BN1012_Phect3138 CDS
T09856
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pect
Candidatus Phaeomarinibacter ectocarpi
Pathway
pect00260
Glycine, serine and threonine metabolism
pect00460
Cyanoamino acid metabolism
pect00630
Glyoxylate and dicarboxylate metabolism
pect00670
One carbon pool by folate
pect00680
Methane metabolism
pect01100
Metabolic pathways
pect01110
Biosynthesis of secondary metabolites
pect01120
Microbial metabolism in diverse environments
pect01200
Carbon metabolism
pect01230
Biosynthesis of amino acids
pect01240
Biosynthesis of cofactors
pect04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pect00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BN1012_Phect3138
09102 Energy metabolism
00680 Methane metabolism
BN1012_Phect3138
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BN1012_Phect3138
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BN1012_Phect3138
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BN1012_Phect3138
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BN1012_Phect3138
Enzymes [BR:
pect01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BN1012_Phect3138
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
QSOX_Trx1
Motif
Other DBs
NCBI-ProteinID:
CDO61350
UniProt:
X5MNK2
LinkDB
All DBs
Position
complement(1605495..1606793)
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AA seq
432 aa
AA seq
DB search
MSLQDADNSANDGFFSRSLAETDPDVFASVGRELGRQQTQIELIASENIVSRAVLEAQGS
VLTNKYAEGYPGRRYYGGCEFVDEVEVLAIERAKRLFNCEFANVQPNSGSQANQGAMMAM
IKPGDTILGMSLDAGGHLTHGAKPNQSGKWFNPVQYGVRKQDGHIDYDDVATLAQEHKPK
LIIAGGSAYSPVIDFAKFREIADSVDAFLMVDMAHFAGLVAGGVYPSPLPYADVCTTTTH
KTLRGPRGGMILTNDEKLAKKINSAIFPGIQGGPLMHVIAGKAVAFGEALQPSFKIYAQN
VVENARALSSALQKGGVDIVSGGTDSHLMLVDLRPKNLTGKAAEHSLENAHITCNKNGVP
FDPAPPAITSGVRLGTPAGTTRGFGVAEFSLIGDLITEVLDGLVANPEDNGAVEASVKER
VLELCARFPIYG
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttcaagacgctgataactcggcaaatgatggtttcttcagccggtctttggcc
gagacggacccggatgtctttgcctccgtcggtcgtgagctgggccggcagcaaacgcag
attgagctgattgcctcagagaacatcgtcagccgcgctgtccttgaagcgcagggctcg
gtcctcaccaataaatacgctgagggctatcccgggcgccgctactacggtggctgtgaa
tttgtcgacgaagttgaagtgctggcgattgagcgcgccaagcgtctgttcaattgtgag
ttcgccaatgtgcagcccaactccggcagtcaggccaaccagggcgccatgatggcgatg
atcaagcccggcgataccattctgggcatgagccttgatgcgggcgggcacctgacccac
ggcgcaaagccgaaccagtcgggcaagtggttcaaccctgtgcagtacggggtgcgcaag
caggacggtcacattgactatgatgacgtggccacgctcgcgcaggagcacaaacccaag
ctgattattgctggtggctctgcctattcaccggtcatcgacttcgccaaattccgtgaa
atcgcagatagtgttgatgccttcttgatggtcgacatggcgcactttgcaggtctggtg
gccggcggggtctatcccagcccgctgccctatgcggatgtctgcaccaccaccacgcat
aagacgcttcgtggcccccgcggcggcatgatcctcaccaatgacgagaagctggcgaag
aagatcaattcagccattttccccggcattcagggcggtccgctgatgcatgtgattgcc
ggcaaggcggttgcgttcggggaagccctccagcccagcttcaagatctacgcacaaaat
gtcgtcgagaatgcacgcgccctgtcttcggcgctgcaaaagggcggcgtggacatcgtg
tccggcggcaccgacagccatctgatgctggtggacctgcgtcccaaaaacctcaccggc
aaggcagccgagcattccctcgaaaacgcgcacatcacctgcaacaagaacggtgtgccg
tttgatccagcccctccggccattacgtccggggttcgtctgggaacgccggccggcacg
acacgcggctttggcgtagctgagttctcgctcattggtgatctcatcaccgaagttctg
gatggcctggtggccaatcctgaggacaacggggctgttgaggcctccgtcaaagagcgg
gtcctcgaattgtgtgcacgtttcccgatttacgggtaa
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