Candidatus Phaeomarinibacter ectocarpi: BN1012_Phect3185
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Entry
BN1012_Phect3185 CDS
T09856
Name
(GenBank) Uracil-DNA glycosylase, family 5
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pect
Candidatus Phaeomarinibacter ectocarpi
Pathway
pect03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pect00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BN1012_Phect3185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pect03400
]
BN1012_Phect3185
Enzymes [BR:
pect01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BN1012_Phect3185
DNA repair and recombination proteins [BR:
pect03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BN1012_Phect3185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CDO61397
UniProt:
X5MF71
LinkDB
All DBs
Position
1648496..1649182
Genome browser
AA seq
228 aa
AA seq
DB search
MSRASSKNIPDITPVAEPPYDCPHCPRLVAFHEENRAKHPDWHNGPVESFGDPDARLLIV
GLAPGLQGANKTARPFTGDYAGDLLYATLTKFGFTQGTYDARPDDGLILHDAMITNAVRC
VPPQNKPTTAEIHTCRAFLIGRIKALPKITHMLALGRIAHESVLRMGGYRLADHPFGHAS
RHELDGIVMYDSYHCSRYNTNTGRLTEEMFEDVFSQITDDLKRQPEKA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcgcatccagcaaaaatatcccggacatcacacccgtcgccgagccgccctac
gactgcccgcattgtccgcggctcgtggcgtttcatgaggaaaaccgggcgaagcacccc
gactggcacaacggccctgtggagtccttcggcgatcccgacgcccgactgctgattgtt
ggcctagccccgggcctgcaaggtgccaacaagacggcccggccctttaccggcgattac
gcaggtgacctgctttacgcaaccctgacaaaatttggcttcacacaaggcacctatgat
gcccggccagacgatggactgatactccacgacgccatgataaccaatgctgtgagatgc
gtgccgccgcaaaacaagccgacgactgcagaaatccatacctgtcgggccttcctcatc
gggcgcatcaaggcacttccaaagatcacccacatgctggccctgggccgtatcgcccat
gaaagcgttctgcgcatgggcggctaccgattggccgaccaccccttcggccacgccagc
cggcatgagctcgatggcattgtgatgtacgacagctatcactgctcccgctacaacacg
aacaccggccgtctcaccgaagaaatgtttgaagatgtattttctcagattacggatgat
ctgaaacgccagcctgagaaggcctaa
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