Candidatus Phaeomarinobacter ectocarpi: BN1012_Phect410
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Entry
BN1012_Phect410 CDS
T09856
Name
(GenBank) Penicillin-binding protein 2 (PBP-2)
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pect
Candidatus Phaeomarinobacter ectocarpi
Pathway
pect00550
Peptidoglycan biosynthesis
pect01100
Metabolic pathways
pect01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pect00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BN1012_Phect410
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BN1012_Phect410
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pect01011
]
BN1012_Phect410
Enzymes [BR:
pect01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
BN1012_Phect410
Peptidoglycan biosynthesis and degradation proteins [BR:
pect01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
BN1012_Phect410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Beta-lactamase2
DUF5725
Motif
Other DBs
NCBI-ProteinID:
CDO58624
UniProt:
X5MDN0
LinkDB
All DBs
Position
complement(2091097..2093013)
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AA seq
638 aa
AA seq
DB search
MALDDRDADKQKMFSRRAAILGGGQVALFTVLAGRMYYLQVIESQEYEILAEENRVNVRL
LPPLRGEILDRFGEKLASNRQNFRVVLIPEQTDDVETTLDKLSEIIPISDRTRKRLLREV
RQKRGFVPLTVAENLEWESFAEINIHTPDLPGLQPEVGDTRHYPYGEDLAHVVGYVAAVT
DKDLEGANDPLLQLPGFRVGRSGVERLLENELRGRAGNSRVEVNAFGRVIRELAKDPGTP
GDEVVLTLDMDIQRYATERVRGESASVVVMDVLTGELVSIVSAPGFDPNLFNVGLSQAEW
DGLTNNELNPLVNKTLAGQYPPGSTYKMIVALAALEAGTISPRRMISCTGKVTLGSHDFH
CWKRGGHGPVNMVEAIKQSCNVYFYEIGKRVGIDKIEEMSRRFGLGDQLAVDMAGEKSGL
VPSRGWKRATTGISWQQGETLNASIGQGYVLTTPLQLATMAARLANGGNGVRPWLVRSVG
GQLREMPQVVPMGIDPAHMKVIQDGMDAVVNIPGGTAFRSRLPLENASMAGKTGTALVRR
ISREERARGVLKNNELPWKFRDHALFVGYGPVENPRYSISVIVDHGGGGSRAAAPVAKDI
MTRVLTRDPMQMSAYEKLTPGSDVTSLESAADASGGRG
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcactagatgatcgcgatgcagataagcagaagatgttttcccgccgggcagccatt
cttggcggaggccaggtggcgcttttcacggtgcttgccgggcggatgtactatctgcag
gtgattgaaagccaggaatacgaaattctggcggaagaaaaccgcgtcaatgttcggctg
ctgccacccctgcggggtgaaattctggaccgcttcggagagaagctggcgtccaaccgc
cagaatttccgcgttgtgctgatccccgagcagacagatgacgtcgagaccaccctcgac
aagctctccgagattattcccatttctgaccggacccgtaagcgcctgctgcgcgaagtg
cgtcagaagcgtggctttgttcctctcacggttgcggaaaaccttgagtgggaatccttt
gccgagatcaatatccacacaccagatcttccgggtcttcagccggaggtgggcgatacg
cggcattatccgtatggagaagacctggctcacgtggtggggtatgtggccgccgttacg
gacaaggatctggagggcgccaacgacccgctcttgcaactgccgggctttcgggttgga
cggtcgggtgttgagcgactgctggagaacgaactgcgcggacgcgcgggcaacagccgc
gttgaggtgaatgcatttggccgggtcattcgtgagctggccaaggatcccggcacaccg
ggggatgaagttgttctgaccctcgacatggacattcagcgctacgcaactgagcgtgtg
cgcggggagagtgcgtctgtcgttgtgatggatgtgttgaccggcgaacttgtgtcgatt
gtgtctgcgcctggatttgaccccaatctgttcaatgtcggccttagtcaggccgagtgg
gatgggctgacgaacaatgagctcaatcccctggtgaacaagacactggccgggcaatac
ccgccggggtctacctacaagatgattgttgctcttgccgcccttgaggcggggacgatc
agtccgcgtcgcatgatctcctgcaccggcaaggtgacgctgggcagtcatgacttccac
tgctggaaacgcggggggcatgggccggtcaatatggtcgaagccatcaagcagtcctgc
aatgtctatttctatgaaatcggcaagcgcgttggcatcgacaagattgaggaaatgtcg
cggcgctttggtctgggtgaccaactggctgttgatatggcgggcgagaaatcgggcctg
gtaccgtcgcgcggctggaagcgcgccacgacgggtatttcctggcaacagggtgaaacg
ctcaatgcctcgatcgggcagggctatgtgctgacgacgccgctgcagctggcaaccatg
gcggcgcgcctcgccaatggcggcaatggtgttcggccgtggcttgtgcggtccgtaggc
gggcaactgcgagaaatgcctcaggtggtgccaatgggtattgacccggctcatatgaaa
gtcattcaggacggcatggacgcggtagtgaatattcccggtggtacggccttccgttcc
cggctgccgcttgaaaatgccagcatggccggcaagaccgggacagctctggtgcgccgc
atttcgcgtgaagaacgggcgaggggcgtgctcaagaataacgagctgccatggaagttc
cgtgaccacgcgttgttcgtcggctatggacccgttgaaaacccacgctattccatttcc
gtcattgtcgatcatggcggcggcggcagccgtgccgcggctcccgtagcgaaagacatc
atgacgcgcgtcctgacacgcgaccccatgcagatgtccgcgtatgagaagctgacaccg
ggcagtgatgtgacgtcgcttgaaagcgccgcggacgcatcaggaggacgtggctga
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