Candidatus Phaeomarinibacter ectocarpi: BN1012_Phect420
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Entry
BN1012_Phect420 CDS
T09856
Name
(GenBank) Tetracycline efflux protein TetA
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
pect
Candidatus Phaeomarinibacter ectocarpi
Brite
KEGG Orthology (KO) [BR:
pect00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pect02000
]
BN1012_Phect420
01504 Antimicrobial resistance genes [BR:
pect01504
]
BN1012_Phect420
Transporters [BR:
pect02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
BN1012_Phect420
Antimicrobial resistance genes [BR:
pect01504
]
Gene variants
Tetracycline resistance genes
Transporters
BN1012_Phect420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
MFS_1_like
Sugar_tr
MFS_4
TRI12
Nuc_H_symport
LacY_symp
Motif
Other DBs
NCBI-ProteinID:
CDO58634
UniProt:
X5MDN5
LinkDB
All DBs
Position
2102281..2103555
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AA seq
424 aa
AA seq
DB search
MSSEAEATKNPVAKRALPFLLITILIDAIGVGIIVPVLPSLITEVTELDLSDAALWGGAL
IFIYALMSFLFAPVLGNLSDRFGRRPVLIIGLTVLGIDYVVMALAPTIWWLLVGRTMSGI
AAATFTTANAYIADVTTPNDRAKSYGLLGAAWGTGFMMGPVLGGLVADFADSARAPFYLA
AVLAFANAAYGFLLLPESLPPEKRRAFDIKRANTIGAIRMVAKHPGLLGLLIAMVFYQIG
HDANPAIWSFYTMYKFGWDAGDVGWSLGFVGVCLIFSMGWLTGYAVPRLGEKRAILIGFT
SAGIGFLGYALATQSWMMYVATIFFAMVGIGSSALRSVLSKQVSETEQGELQGAITSVMG
LTAIFTPLVMTGLFSAFTGDDAPIHLPGAPYLLATVAMVASICMVLIFIGRVAVKPQPAR
GDAD
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
gtgtccagcgaagcggaggccacgaaaaatccggtcgccaaacgcgcccttcccttcctg
ctcatcaccattctgattgatgcgatcggcgtcggcatcattgtgccggtattgcccagc
ctgatcaccgaagtaacggagctggacctgtccgatgccgccttgtggggcggcgcgctc
attttcatctacgccctgatgagctttctgtttgcgccggtgctcggcaatctgtcggac
cggtttggccgacggccggtgcttattattggcctgaccgttcttggtatcgactacgtg
gtcatggcgctggcccccactatctggtggcttttggtcgggcgcaccatgtccggcatc
gctgcggccaccttcaccaccgccaatgcctacatcgccgacgtgacaacacccaatgac
cgcgcgaaatcctacgggctgctcggtgccgcatggggcacaggcttcatgatggggccg
gtgctgggtggattggtagccgactttgccgacagcgcccgcgcaccattctatctggct
gccgtgcttgcctttgccaacgccgcttacggcttcctcctcctgcccgaaagcctgccc
cccgagaagcgccgcgcctttgatatcaagcgggcaaacaccattggtgctatccgcatg
gtcgccaagcatccgggcctgctggggctgctcatcgcgatggtgttctaccagatcggt
cacgatgccaatccggccatttggtcgttctacaccatgtacaaattcggatgggacgcg
ggcgacgtcggctggtcgctggggtttgtcggcgtctgcctgatcttctcgatgggatgg
ctgacaggctatgctgtcccgcgactgggagaaaaacgcgccatactcattggattcacc
agcgcaggcatcggctttctgggatatgccctcgccactcaaagctggatgatgtacgtc
gccaccatcttcttcgccatggtcggcatcggctcttccgccctgcggtcagttctgtcc
aaacaggtgtcagaaacagaacagggcgaactgcagggtgccatcaccagcgtgatgggc
ctcacggccatctttacgccgcttgtgatgaccggtcttttctcggccttcaccggtgac
gatgcaccaatccatctgcccggagcgccctacctcctcgcaacggtggccatggtcgcg
agcatctgcatggtcctgatcttcatcgggcgagtggccgtcaaaccgcagccggcaaga
ggtgacgcggactaa
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