Candidatus Phaeomarinobacter ectocarpi: BN1012_Phect451
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Entry
BN1012_Phect451 CDS
T09856
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pect
Candidatus Phaeomarinobacter ectocarpi
Pathway
pect03420
Nucleotide excision repair
pect03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pect00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BN1012_Phect451
03430 Mismatch repair
BN1012_Phect451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pect03400
]
BN1012_Phect451
Enzymes [BR:
pect01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BN1012_Phect451
DNA repair and recombination proteins [BR:
pect03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BN1012_Phect451
MMR (mismatch excision repair)
Other MMR factors
BN1012_Phect451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
DUF3553
DUF7432
AAA_25
DEAD
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CDO58665
UniProt:
X5MKK8
LinkDB
All DBs
Position
2135130..2137463
Genome browser
AA seq
777 aa
AA seq
DB search
MSDPFDLGDIPEEETARGPSISERAAAGVAAPTPYLDSLNGPQRQAVEALDGPVLVLAGA
GTGKTRVLTTRLAHVLNTKRAWPGQILAVTFTNKAAREMKQRIGALIGGVVEGMQWLGTF
HALGAKILRRHAELVDLRSDFTILDADDQVRLMKQIIKAADIDEKRWPARQLANLIDSWK
NRALAPDQVPKGESFAFANGKGAELYAAYQARLKTLNAVDFGDLLVENLRIFQEHPEVLE
DYQQRFKYILVDEYQDTNVAQYLWLRLLARGHKNICCVGDDDQSIYGWRGAEVDNILKFE
KDFPGATVVRLEQNYRSTPHILQAASGLITANEGRLGKTLWTDANDGEKLTVRGVWDGEE
EARTIGEDIEQFQRKDHQLNEMAILVRASFQMREFEDRFINLGLPYRVIGGPRFYERLEI
RDANAYFRLVAQPDDDLAFERIINKPKRGLGNVAVQTLHQAARAQGTSLWRAARPLIESE
ELKPQARRALTIFVESIERWRQLMPALPHTELAEQILDESGYTEMWQNDKSADAPGRLDN
LKELVRSMEQFENLAGYLEHVSLVMDREDQEADDKINLMTLHAAKGLEFETVFLPGWEEG
LFPHQRALDESGLAGLEEERRLAYVGITRAKQRAKISFAANRRIHNLWQNSLPSRFIDEL
PETNVEVESQGDTYSYGPSRFDEGGFAGSEYSSPGWQRAKAKAGNHATPPRRAPMIDAQA
TLIATSAPDAEGFERGERIFHQKFGYGCIQDIEGTKLTVEFEKAGTKKVIASFVERP
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacccttttgaccttggcgacattcctgaagaggaaacagcgcgcggcccgtcc
atttcggaacgggcggcggcaggtgttgctgcgcccacgccttatctggacagcctgaac
ggcccgcaacgacaggccgttgaagctctggatggtcctgttctggtgctcgcaggcgcc
ggaacaggcaaaacccgggtgctcaccacccgtctcgcccatgtgctcaacaccaagcgt
gcctggcccggccagatactggctgtgaccttcaccaacaaggccgcacgcgagatgaag
cagcgcatcggcgcgctcataggtggcgtggtcgaaggcatgcagtggctcggcacattc
catgcgctgggggcgaaaattctgcgccgccatgccgagctcgtcgatctgagatcagac
ttcaccattctggacgcagacgaccaggtgcgcttgatgaagcagatcatcaaggcggcc
gacattgatgaaaaacgctggcctgcccgtcagctggccaacctcattgacagctggaag
aatcgggcccttgcccccgaccaggtgcccaagggagaaagcttcgcctttgccaatggc
aagggtgctgaactctatgcggcctaccaggcccgcctcaaaactctcaacgccgtcgat
ttcggcgatctgctggtagaaaatctgcgcatcttccaggaacacccggaagtgctggaa
gattaccagcagcggttcaaatacattctggtggatgagtatcaggataccaacgtcgcc
cagtatctgtggcttcggctccttgcgcgcggccacaagaacatctgctgcgtcggggat
gatgaccagtccatctatggctggcgcggcgctgaagtcgacaacatcctgaaatttgaa
aaagacttccccggcgctacggtcgtgcgcctggagcagaactaccggtcgacaccccac
attctgcaagcagcctcaggtctcatcaccgccaatgaaggccgccttggcaaaaccctg
tggaccgatgcaaatgacggcgaaaagctgaccgtgcgcggcgtctgggatggcgaagaa
gaagcccggaccatcggcgaagacatcgagcagtttcagcgcaaggaccaccagcttaac
gagatggcaatcctggtacgcgcctccttccagatgcgtgagtttgaagaccgcttcata
aatctcggcctgccctaccgcgtcattggcggcccccgcttctacgagcgtctcgaaatt
cgcgacgccaacgcctatttccgcctcgtcgcccagccggatgacgacctggcctttgag
cgcatcatcaataaacccaaacgcggcctcggcaatgtcgccgtgcaaaccctgcatcag
gctgcgcgggcacagggcacgtcgctttggcgtgccgcacgcccgctgattgagtcagaa
gagctgaagccgcaggcacgccgcgccctgaccatctttgtggaaagcatcgagcgctgg
cgtcaactgatgcccgccctaccccacacggaactcgctgaacaaattctcgacgagtcc
ggctacaccgaaatgtggcagaacgacaaatccgcggatgcacctggccgcctcgacaac
ctcaaggaactcgtgcgctcaatggagcagttcgagaacttggcaggctaccttgagcat
gtgtccttggtaatggaccgggaagatcaggaagctgacgacaagatcaacctgatgacc
ctgcacgcggccaagggcctggagtttgaaacagtcttcctgccgggctgggaagaaggt
ctctttccccatcagcgcgcccttgatgaaagcggattggccggcctcgaagaagaacgc
cgtctggcctatgtgggcattacccgcgccaagcagcgcgccaagatttcctttgctgcc
aatcggcgcatccacaatctgtggcagaactccctgccgtcgcgcttcatcgatgaattg
cccgaaacaaatgtcgaagtcgaaagccagggcgacacctattcctacggcccctcccgc
tttgatgagggcggctttgcaggcagcgaatattcaagtcccggctggcagcgcgccaag
gccaaggcaggcaatcacgcaacgccacccaggcgggcaccgatgattgacgcgcaggca
acgctgattgccacctctgctcccgatgcggagggctttgagcgcggcgagcgtatcttc
caccaaaagttcggctatggctgcattcaggatattgaaggcaccaagctgacggtcgaa
tttgaaaaagcaggcaccaaaaaggtgatcgcgagttttgtggagcggccatga
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integrated database retrieval system
