Candidatus Phaeomarinibacter ectocarpi: BN1012_Phect664
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Entry
BN1012_Phect664 CDS
T09856
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pect
Candidatus Phaeomarinibacter ectocarpi
Brite
KEGG Orthology (KO) [BR:
pect00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pect03021
]
BN1012_Phect664
Transcription machinery [BR:
pect03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BN1012_Phect664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
HTH_25
Motif
Other DBs
NCBI-ProteinID:
CDO58878
UniProt:
X5M716
LinkDB
All DBs
Position
2354929..2355843
Genome browser
AA seq
304 aa
AA seq
DB search
MATKSIPSLTPDGSLTRYLQEIRKFPMLEPEQEYMLARRYAEHEDPDAAHKLVTSHLRLV
AKIAMGYRGYGLPIAEVISEGNVGLMQAVKRFDPEKGFRLSTYAMWWVRAAIQEYVLRSW
SLVKIGTTAAQKKLFFNLRKAKGKIDALEDGDLRPEHVQSIATKLGVPEQDVINMNRRMS
NGGDQSLNAPMRADADGGEWQDWLVDESESAEETISESEELLRRREMLAASMQTLNEREM
HILTERRLKDEPSTLEELSQEYGISRERVRQIEVRAFEKLQKAMKAAHKDEIRATREKAE
EYAS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaaatccattcctagtctgacgccagatggcagcctgacgcgctatctgcag
gagatcagaaaattccccatgctcgagcccgagcaggaatacatgctcgcgcgccgctat
gcggaacacgaagaccctgatgcggcccacaaactcgtgacaagccatctgcgcctcgtc
gccaagatcgccatgggctatcgcggctacggcctgccgatcgccgaggtgatttccgaa
ggcaatgtcggtctcatgcaggcggtcaagcgcttcgatcctgaaaaagggttccgcctc
tccacctatgccatgtggtgggtccgagccgccattcaggaatacgtcctgcgctcatgg
tccctggtgaagatcggcacgacggccgcgcagaagaaactgttcttcaacctgcgcaag
gccaagggcaagatcgacgccctggaagatggcgacctgcgtcctgaacacgtgcagtcc
atcgccaccaagcttggcgtgcccgagcaggacgtgatcaacatgaaccgtcgcatgtcc
aatgggggcgatcagtccctcaatgcgcccatgcgcgcggatgctgacggcggtgagtgg
caggactggctggtagacgaaagcgaaagcgctgaagagacgatctctgaaagcgaagag
cttctgcgccgccgcgagatgctggcggcctccatgcagaccctcaatgagcgcgaaatg
cacatccttaccgagcggcgcctcaaggatgagccctcaacgctcgaagagctgagccaa
gaatacggcatcagccgcgaacgcgtccgccagatcgaagtccgggcattcgaaaagctg
caaaaagccatgaaggccgcccacaaggacgaaatccgggcgacccgcgaaaaggctgag
gaatacgcaagctaa
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