Candidatus Phaeomarinobacter ectocarpi: BN1012_Phect7
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Entry
BN1012_Phect7 CDS
T09856
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pect
Candidatus Phaeomarinobacter ectocarpi
Brite
KEGG Orthology (KO) [BR:
pect00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pect03032
]
BN1012_Phect7
03400 DNA repair and recombination proteins [BR:
pect03400
]
BN1012_Phect7
Enzymes [BR:
pect01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BN1012_Phect7
DNA replication proteins [BR:
pect03032
]
Prokaryotic type
DNA Topoisomerases
BN1012_Phect7
DNA repair and recombination proteins [BR:
pect03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BN1012_Phect7
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_insert
GyrB_hook
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
CDO58221
UniProt:
X5MLA6
LinkDB
All DBs
Position
5704..8163
Genome browser
AA seq
819 aa
AA seq
DB search
MSDQSNTPQGVDPDEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAID
EALAGHCDTVNITLNADGSVTVRDNGRGIPTQMHTEEGISAAEVIMTQLHAGGKFDQNSY
KVSGGLHGVGVSVVNALSVRLDVKIWRNGKTHEMQFVHGDSQAPLAVTGEAPQDEGKGKQ
RTGTEITFLPSTDTFTMTDFDFPTLEHRLRELAFLNSGVRITISDLRGVEPNEVELYYEG
GIEEFVRYLDRNRGTLFEAPIAIHAEKDDITVDVALWWNDSFHENVLTFTNNIPQRDGGT
HLAGFRGALTRVINGYANAHGLLKREKVSLTGDDAREGLTCIVSVKVPDPKFSSQTKDKL
VSSEVRPIVESIVNEQLNSWFEEHPGEAKGIIGKVVDAAAAREAARKARELTRRKGALDV
SSLPGKLADCQSKDPAISELFLVEGDSAGGSAKQARDRANQAVLPLRGKILNVERARFDK
MLSSNEIGTLITALGTGIGRDDFNIEKLRYHKIIIMTDADVDGAHIRTLLLTFFYRQMPE
VIEGGYLYIAQPPLYKIKRGQSETYVKDERGLEDYLISTGLDGAVLTLDNGEQMAGEDLR
QVVEEARKARTSFDSVRARYPVFIVEQAAIAGALNPDVMEDAEKAQGAADYIARRLDMLS
EETERGWNGQLTDDGGLQFEREVRGVREIHVLDGRLIASADARRLDSMTARLQEVYAKAA
RFERKDGVTEIRSPMQLLEAIFDAGRKGNAMQRYKGLGEMNPDQLWETTLDPSARTLLQV
RVEHMDEANDLFEKLMGDVVEPRRAFIQDNALQAANLDV
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcagagcaacacgccgcaaggcgttgacccggacgagtacggcgcggattcc
atcaaggttctgaagggccttgatgccgtgcgcaaacgtccgggcatgtatatcggtgat
accgatgacggctcgggacttcatcacatggtttacgaagtagtggacaacgccattgac
gaggcgttggccggccactgcgacacggtgaatatcaccctcaatgcggatggctccgtc
accgtgcgggacaatggccgcggcatccccacccagatgcataccgaagaaggcatttcg
gctgctgaagtcatcatgacccagctgcatgccggcggtaagttcgaccagaactcctac
aaggtctccggtggtctgcacggcgtgggcgtctcggtcgtgaacgcgctgtccgtacgt
ctcgacgtcaaaatctggcgcaacggcaagacccatgaaatgcagttcgtgcatggcgac
agccaggcgccgcttgcggtcactggtgaagcgccgcaggacgaaggcaagggcaagcag
cgcacgggtacggaaattacattcctgccctccacagatacgttcaccatgacggatttc
gacttccccacgctggaacatcgtctgcgtgagctggccttcctcaattcaggtgtccgc
atcacgatttctgacctgcgcggcgtcgagcccaatgaggtcgagctttactatgaaggc
ggcatcgaagagttcgttcggtatctggaccgcaaccgcggcacgctgtttgaggcacct
atcgccattcacgcggaaaaagacgacatcaccgttgatgtggctttgtggtggaatgat
tccttccacgagaacgtgctgaccttcaccaacaacattccccagcgcgatggcgggacc
caccttgcgggcttccgtggcgcgctcacccgcgtcatcaacggctacgcaaatgcccat
ggcctgctgaaacgcgaaaaggtttctctcacaggcgatgacgcgcgcgaaggcctgacc
tgcatcgtgtccgtcaaagtgccggacccaaaattctcgtcccagaccaaagacaagctg
gtctcgtcggaagtgcgtcccattgtggagagcatcgtcaacgagcagctcaacagctgg
tttgaagagcacccaggtgaagccaaaggcatcatcggcaaggtggtggatgcagcggcc
gcccgcgaagccgcgcgcaaggcccgcgaactcacccgccgcaaaggtgcgctcgatgtg
tcgtccttgcccggcaaacttgccgattgccagtccaaggacccggcgatttccgaactc
ttcctggtggagggcgattcagctggtgggtccgccaagcaggcccgtgaccgtgccaat
caggcggtgctgcccctgcgcggcaaaatcctcaatgtggaacgcgcgcgtttcgacaag
atgctgtcgtccaacgaaatcggcacgctcataacggcgttgggtaccggcatcggccgc
gatgatttcaacatcgaaaagctgcgctaccacaagatcatcatcatgaccgacgccgac
gtcgacggcgcgcacatcagaaccctgctgctaactttcttctaccggcagatgccggaa
gtcattgaaggcggctatctctacatcgcccagccgccgctctacaaaatcaagcgcggc
cagtccgagacctacgtcaaggatgagcgcggtcttgaggactatctgatttcaaccggc
ctcgatggcgccgtgctgacgctggacaatggcgagcagatggccggtgaagacctgcgt
caggtcgttgaagaagcgcgcaaagcacgcacatcatttgattccgttcgcgcccgctat
ccggtcttcatcgtggagcaggccgccatcgccggtgccctcaacccggacgtcatggaa
gacgcggaaaaagcacagggcgctgctgactacattgcccgccgcctcgacatgctgtcc
gaggagacagaacgcggatggaatggccagctgaccgatgatgggggtctgcagttcgag
cgcgaagtgcgtggtgtccgcgaaatccatgtgctcgatggtcgcctcattgcctcagcc
gatgcccgtcgcctggattcaatgacggcgcgtctgcaggaggtctacgccaaggccgcc
cgctttgagcgcaaggacggcgtgacggaaatccgcagccccatgcagctgctggaagcc
atctttgacgccggccgcaaaggtaacgccatgcagcgctacaagggtctgggtgaaatg
aacccggaccagctgtgggaaaccacgctcgacccctccgcccgcaccctgttgcaggtc
agggtcgaacacatggacgaagccaacgacctgtttgaaaaactcatgggcgacgtcgtg
gaaccccgccgcgccttcattcaggacaacgcgcttcaggcggccaatctcgacgtttag
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