Candidatus Phaeomarinibacter ectocarpi: BN1012_Phect888
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Entry
BN1012_Phect888 CDS
T09856
Name
(GenBank) Transcriptional activator protein LuxR
KO
K19731
LuxR family transcriptional regulator, quorum-sensing system regulator CciR
Organism
pect
Candidatus Phaeomarinibacter ectocarpi
Pathway
pect02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pect00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BN1012_Phect888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pect03000
]
BN1012_Phect888
Transcription factors [BR:
pect03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
BN1012_Phect888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
HTH_10
HTH_28
HTH_24
HTH_38
HTH_23
Motif
Other DBs
NCBI-ProteinID:
CDO59102
UniProt:
X5MCE6
LinkDB
All DBs
Position
complement(2610067..2610882)
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AA seq
271 aa
AA seq
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MQLRSNVRSRTDSASSQPQKEGERDWDLLWEEALASKDPLRLFDVLANRLADFGFDQVAY
VNFQHSADLLEGKSTDGPDGAANARRTVNYGEDWIEFYGREGYFEDDVLFDLALTNQRPI
EWDQVQTSIDLTKRQQEIFDAGFDAGHRFGVTIPFHGPVGRVATLSISTSGSQSDIPRDP
VQVFALSAQFHAMFDALAGSKELVPPPPRLSAREYECLSWAAQGKSNRDIAQIIGISDPT
VQFHMGNVMKKLKVSSRVSAVFEASRMGLLR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
gtgcagttgcgatcaaatgtccggtcacggacggattctgcgtcctcacagccgcagaag
gagggcgaacgcgactgggatttgctctgggaggaggcgctcgcctccaaggacccgctt
cggctttttgacgtgctcgccaatcggctggctgatttcgggtttgatcaggtcgcctac
gtcaatttccaacactcagccgacctgctggaaggcaagtcgacagacggccctgatggc
gccgccaatgcgcgccggaccgtcaattatggtgaagactggatcgagttttacggtcgt
gaaggctacttcgaagacgacgtcctgtttgatctggcgcttaccaatcagcgtcccatc
gagtgggaccaggtgcaaacctccattgacctgaccaaacgccagcaggaaatatttgat
gcaggctttgatgcgggccaccggtttggggtgacgattcccttccatggacccgttgga
cgtgtggcaaccctctcgatttccaccagtgggtcgcagtcggatatcccgcgcgacccg
gtgcaggtgttcgctttgtcggcgcagttccacgcgatgtttgatgcgttggccgggtcc
aaggaattggtgccgccgcccccgcgcctgagtgcacgcgaatatgagtgcctgtcatgg
gcggcgcagggcaaaagcaatcgcgatatcgctcagattatcggcatatccgacccgacg
gttcagtttcacatgggcaatgtgatgaaaaagctgaaggtctcgtcgcgggtgtcggcg
gtcttcgaggcatcccgcatgggtctgctgcgctag
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