Candidatus Phaeomarinibacter ectocarpi: BN1012_Phect966
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Entry
BN1012_Phect966 CDS
T09856
Name
(GenBank) RNA polymerase sigma factor RpoH-related protein
KO
K03089
RNA polymerase sigma-32 factor
Organism
pect
Candidatus Phaeomarinibacter ectocarpi
Brite
KEGG Orthology (KO) [BR:
pect00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pect03021
]
BN1012_Phect966
Transcription machinery [BR:
pect03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BN1012_Phect966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
CDO59180
UniProt:
X5ML57
LinkDB
All DBs
Position
2701871..2702770
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AA seq
299 aa
AA seq
DB search
MPATSAVSSQGSERKFIRTAMKAPLLEADHELDLARAWHDHKDEDALHELTSAYMRLVIA
MAARFRIYGLPMGDLVQEGNVGLMQAAQRFDPERGVRFSTYASWWIRSSIQDYILRNWSI
VRTGTTAAQKSLFFNLRRLRALINDGGSATMSPEGRTFVATQLRVPMRDVENMESRLSAS
DRSLNAAVPGMDSGEGGSMEWQDLLADERPDPEDETTDAHDADVRRRWLARALETLSERE
LFIIKRRRLSEDGETLESLGKELGISKERVRQVEHQALNKLRAALLKETDDVDALVDGA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgccggcaacgtctgcagtttcgtctcagggttctgaaagaaaattcattcgcacggcc
atgaaagcgccgttgcttgaggccgatcacgaactcgatctggcccgtgcttggcatgac
cacaaggacgaagatgccctccacgagctgacatccgcctatatgcgcctggtgattgcc
atggcggcccgcttccgcatctacggcctgcccatgggcgacctcgtgcaggaaggcaat
gtcggcctgatgcaggctgcccagcgctttgacccggaacgcggcgtccgcttctcaacc
tatgcctcctggtggatccggtcttccatccaggactacatcttgcgcaactggtcgatc
gtccgcaccgggacgaccgctgcccagaaatctctgttcttcaatttgcgtcgcctgcgc
gccctcatcaacgatggcggaagcgcgaccatgtcgcctgaagggcgcaccttcgtagcg
acccagctgcgcgtccccatgcgcgatgttgaaaacatggagtcccgcctgtcggcctcc
gaccggtcgctcaatgcggccgtgccgggcatggattcaggcgaaggcggctccatggaa
tggcaggacctgctggccgatgagcgtcccgacccggaagacgaaacaacagacgcccat
gacgcggatgtgcgtcgtcgctggctggcccgggcgttggagacactgtctgaacgggaa
ctcttcatcatcaagcgtcgccgcctgagcgaagacggggagacgctggaatcccttggc
aaggaactcggtatctcaaaggagcgtgtccgccaggtggaacaccaggcgctgaacaag
ctgcgcgcggcactcctcaaggaaaccgatgatgttgatgccctggtggacggcgcctag
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