Peptoniphilus sp. ING2-D1G: ING2D1G_0005
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Entry
ING2D1G_0005 CDS
T03807
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ped
Peptoniphilus sp. ING2-D1G
Brite
KEGG Orthology (KO) [BR:
ped00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ped03032
]
ING2D1G_0005 (gyrB)
03400 DNA repair and recombination proteins [BR:
ped03400
]
ING2D1G_0005 (gyrB)
Enzymes [BR:
ped01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ING2D1G_0005 (gyrB)
DNA replication proteins [BR:
ped03032
]
Prokaryotic type
DNA Topoisomerases
ING2D1G_0005 (gyrB)
DNA repair and recombination proteins [BR:
ped03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ING2D1G_0005 (gyrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
TOPRIM_C
PEPcase_2
Motif
Other DBs
NCBI-ProteinID:
CDZ74206
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Position
I:3902..5818
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AA seq
638 aa
AA seq
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MKNNERHYGAEDIQVLTGLEPVRKRPGMYIGSTGEKGLHHLVYEVVDNSIDEALAGICDK
ITIEIHENGAISVTDNGSGIPTEIHPQTKKSTVETVLTILHAGGKFTNKAYSVSGGLHGV
GVSVVNALSIELVATIKRNGKIYQQKFSRGKAVSELEIIGTTEKSDTGTKIYFVPDEEIF
DTVIFNDEVLLRRFREMAFLNKGITIEFIDRRNDKSEIFMYEGGIKSFVEFINRKKTPVQ
KKIIYIDEEREKVVVEIALQYTDSYNETVLTFANNINTEEGGTHLSGLRSALTRTINEYG
RKYNIIKEKEENLSGEDVREGLTAVISVKLPNPQFEGQTKAKLGNSEIRGIVDSVLSENL
ENFLEENPKIAKSILEKALSARRAREAARKARDLSRKKNILDSMALPGKLKDCQNTDNET
TEIFLVEGNSAGGSATDARDSTYQAILPLRGKIMNVEKARIDRVLNSEEIKAMITAFGTG
IGEDFNIEDLRYNKIIIMTDADIDGAHIMTLLLTFLFRYLRPLIEEGHVYVAKPPLFGIL
HRNKAVRYCYDEAELQSALKELGKDKKYEIKRYKGLGEMNAEDLWETTMNPDHRILLRIE
LDDLVYADETFDTLMGSEVEPRREFIQENAKYVDYIDA
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataatgaaagacattatggtgccgaagatattcaggttttaacaggtcttgaa
cctgtaagaaaaagacctggtatgtatatcggttctacaggagaaaagggactgcatcat
ttagtatatgaggtagttgacaattccattgacgaagccttggcgggtatttgcgacaaa
ataacaatcgaaattcacgaaaatggagcgatttctgtaaccgataacggctcggggata
cctaccgaaattcatccccaaaccaaaaaaagcacagttgaaaccgtacttaccatactt
catgcagggggaaaattcaccaataaagcttattcagtatcgggaggtctgcacggagta
ggggtttccgtagtaaatgcactttcaattgaactggtagcaacaatcaagagaaatgga
aaaatatatcagcaaaaattctcaagaggaaaagctgtaagtgagcttgaaattatcggc
actactgaaaaatccgatacgggaacaaaaatatattttgtacccgatgaagaaatattt
gatacggttatatttaacgatgaagttctcttaagaagatttagagaaatggcattttta
aacaaaggcatcacaatagaatttatagatagaagaaatgataaaagtgaaatttttatg
tacgaaggtggaataaaatcctttgtagagtttataaatagaaagaaaactcccgtacaa
aaaaaaataatttatatagatgaagaaagagaaaaggttgtagtagagatagctcttcaa
tacacggattcctacaatgaaaccgtgcttacttttgcaaataacataaatacagaagaa
ggaggaactcacctttcaggactgagatctgcacttacaaggacaataaatgaatatgga
cgaaaatacaatataataaaggaaaaagaagaaaatttatccggtgaagatgtaagagaa
ggtcttacagctgtaatatcggttaaacttcccaatcctcaatttgaaggacaaacaaaa
gcaaagctcggtaattccgaaatcagaggcatagtagattcagtattatctgaaaatttg
gaaaactttttagaggaaaatccaaagattgcaaaatccatattggaaaaagccctttca
gcaagaagagcaagagaggccgcacgaaaggcaagagatctttcaagaaagaaaaatatt
ttggatagcatggctcttcccggaaaactaaaggactgtcagaacaccgacaatgaaaca
acggagattttccttgtggaaggtaattccgcaggaggctcggcgactgatgcaagggat
tcaacttatcaagcaattcttccccttagaggtaagataatgaatgtagaaaaagcaaga
attgacagagtacttaattcagaagaaataaaagccatgataacagccttcggtacaggt
atcggagaagatttcaacattgaagatttaagatataacaagataataataatgaccgat
gccgatatagacggcgctcatataatgacacttctgcttacatttttattcagatactta
agacctctcattgaagaagggcatgtatatgtggcaaaacctccgctttttggaattcta
cacagaaataaagctgtgagatattgttacgatgaagcggaactccaaagcgctttaaag
gaacttggaaaagataaaaaatatgaaataaaacgatataaaggtctcggagagatgaat
gccgaagatctttgggaaacaaccatgaatccggatcacaggatactgcttaggatagaa
ttggatgatttggtttatgctgatgaaacctttgatacactaatgggatccgaagttgaa
cccagacgtgaatttatacaagaaaatgcaaaatatgttgattatatagatgcatag
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