Entry |
|
Symbol |
gyrB
|
Name |
(GenBank) DNA gyrase subunit B
|
KO |
|
Organism |
ped Peptoniphilus sp. ING2-D1G
|
Brite |
KEGG Orthology (KO) [BR:ped00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:ped03032]
ING2D1G_0005 (gyrB)
03400 DNA repair and recombination proteins [BR:ped03400]
ING2D1G_0005 (gyrB)
Enzymes [BR:ped01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ING2D1G_0005 (gyrB)
DNA replication proteins [BR:ped03032]
Prokaryotic type
DNA Topoisomerases
ING2D1G_0005 (gyrB)
DNA repair and recombination proteins [BR:ped03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ING2D1G_0005 (gyrB)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
I:3902..5818
|
AA seq |
638 aa
MKNNERHYGAEDIQVLTGLEPVRKRPGMYIGSTGEKGLHHLVYEVVDNSIDEALAGICDK
ITIEIHENGAISVTDNGSGIPTEIHPQTKKSTVETVLTILHAGGKFTNKAYSVSGGLHGV
GVSVVNALSIELVATIKRNGKIYQQKFSRGKAVSELEIIGTTEKSDTGTKIYFVPDEEIF
DTVIFNDEVLLRRFREMAFLNKGITIEFIDRRNDKSEIFMYEGGIKSFVEFINRKKTPVQ
KKIIYIDEEREKVVVEIALQYTDSYNETVLTFANNINTEEGGTHLSGLRSALTRTINEYG
RKYNIIKEKEENLSGEDVREGLTAVISVKLPNPQFEGQTKAKLGNSEIRGIVDSVLSENL
ENFLEENPKIAKSILEKALSARRAREAARKARDLSRKKNILDSMALPGKLKDCQNTDNET
TEIFLVEGNSAGGSATDARDSTYQAILPLRGKIMNVEKARIDRVLNSEEIKAMITAFGTG
IGEDFNIEDLRYNKIIIMTDADIDGAHIMTLLLTFLFRYLRPLIEEGHVYVAKPPLFGIL
HRNKAVRYCYDEAELQSALKELGKDKKYEIKRYKGLGEMNAEDLWETTMNPDHRILLRIE
LDDLVYADETFDTLMGSEVEPRREFIQENAKYVDYIDA |
NT seq |
1917 nt +upstreamnt +downstreamnt
atgaagaataatgaaagacattatggtgccgaagatattcaggttttaacaggtcttgaa
cctgtaagaaaaagacctggtatgtatatcggttctacaggagaaaagggactgcatcat
ttagtatatgaggtagttgacaattccattgacgaagccttggcgggtatttgcgacaaa
ataacaatcgaaattcacgaaaatggagcgatttctgtaaccgataacggctcggggata
cctaccgaaattcatccccaaaccaaaaaaagcacagttgaaaccgtacttaccatactt
catgcagggggaaaattcaccaataaagcttattcagtatcgggaggtctgcacggagta
ggggtttccgtagtaaatgcactttcaattgaactggtagcaacaatcaagagaaatgga
aaaatatatcagcaaaaattctcaagaggaaaagctgtaagtgagcttgaaattatcggc
actactgaaaaatccgatacgggaacaaaaatatattttgtacccgatgaagaaatattt
gatacggttatatttaacgatgaagttctcttaagaagatttagagaaatggcattttta
aacaaaggcatcacaatagaatttatagatagaagaaatgataaaagtgaaatttttatg
tacgaaggtggaataaaatcctttgtagagtttataaatagaaagaaaactcccgtacaa
aaaaaaataatttatatagatgaagaaagagaaaaggttgtagtagagatagctcttcaa
tacacggattcctacaatgaaaccgtgcttacttttgcaaataacataaatacagaagaa
ggaggaactcacctttcaggactgagatctgcacttacaaggacaataaatgaatatgga
cgaaaatacaatataataaaggaaaaagaagaaaatttatccggtgaagatgtaagagaa
ggtcttacagctgtaatatcggttaaacttcccaatcctcaatttgaaggacaaacaaaa
gcaaagctcggtaattccgaaatcagaggcatagtagattcagtattatctgaaaatttg
gaaaactttttagaggaaaatccaaagattgcaaaatccatattggaaaaagccctttca
gcaagaagagcaagagaggccgcacgaaaggcaagagatctttcaagaaagaaaaatatt
ttggatagcatggctcttcccggaaaactaaaggactgtcagaacaccgacaatgaaaca
acggagattttccttgtggaaggtaattccgcaggaggctcggcgactgatgcaagggat
tcaacttatcaagcaattcttccccttagaggtaagataatgaatgtagaaaaagcaaga
attgacagagtacttaattcagaagaaataaaagccatgataacagccttcggtacaggt
atcggagaagatttcaacattgaagatttaagatataacaagataataataatgaccgat
gccgatatagacggcgctcatataatgacacttctgcttacatttttattcagatactta
agacctctcattgaagaagggcatgtatatgtggcaaaacctccgctttttggaattcta
cacagaaataaagctgtgagatattgttacgatgaagcggaactccaaagcgctttaaag
gaacttggaaaagataaaaaatatgaaataaaacgatataaaggtctcggagagatgaat
gccgaagatctttgggaaacaaccatgaatccggatcacaggatactgcttaggatagaa
ttggatgatttggtttatgctgatgaaacctttgatacactaatgggatccgaagttgaa
cccagacgtgaatttatacaagaaaatgcaaaatatgttgattatatagatgcatag |