Peptoniphilus sp. ING2-D1G: ING2D1G_0621
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Entry
ING2D1G_0621 CDS
T03807
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ped
Peptoniphilus sp. ING2-D1G
Pathway
ped03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ped00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ING2D1G_0621 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ped03021
]
ING2D1G_0621 (rho)
03019 Messenger RNA biogenesis [BR:
ped03019
]
ING2D1G_0621 (rho)
Transcription machinery [BR:
ped03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ING2D1G_0621 (rho)
Messenger RNA biogenesis [BR:
ped03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ING2D1G_0621 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
HeH
DUF7440
Spore_III_AA
ABC_tran
NACHT
AAA_14
S1CSD-TOTE-2
AAA_22
AAA
AAA_25
Motif
Other DBs
NCBI-ProteinID:
CDZ74783
LinkDB
All DBs
Position
I:624391..626061
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AA seq
556 aa
AA seq
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MKSKAKKENNSEILKNKSLDELKEIAISMGLDDHISLNRGDYYKYITEGKEPLINNYTAE
ELEEMSVEKLRDIATNHGVKQSYKYKKIELIKKILESSGDSEIDENEIRLKNMNMAELKE
VAENLGIEKPYKYKKSELIEMIKDYQKDEDVFDKYNEDGDNLKEEINIEDLSDNATEIIE
DMEDINYVGGILDLHQDGYGFLRINNYLPGEGDIYVSPSQIRRFRLRNGDEVVGIIRPSK
PNESYNALIYIKSVNGQNPDSSKNRPHFEKLIPLYPRQKLILENNPEDLATRLMDLISPI
GKGQRGLIVSQPKSGKTTLLKKIAKSISNNYPEVKLIVLLIDERPEEVTDMQRSVKGEVV
YSTFDEQPKNHTRVAENVLERAKRLVESGQDVVVLMDSLTRLARAYNLVTPPSGKTLSGG
LDPLSLHKPKRFFGAARNIEEGGSLTILATALIETGSRMDDIIFEEFKGTGNMEVHLDRK
LSERRIFPAIDIYKSGTRKEELLLTDEELNFSWKIRKAMNQDMTTEVTETLLDNLTKYRA
NKEFLNAMKDKFNKYE
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaagcaaagcaaaaaaagaaaataacagcgaaatattaaaaaataaatccttggat
gaattaaaggaaattgcaatatcaatgggtttggatgaccatatttccctaaacagagga
gattattataagtatataacagaaggcaaagaacccttaataaacaattatacagcagaa
gaactggaggaaatgagtgttgaaaaattaagggatattgcaacaaatcacggtgttaaa
caaagctataaatacaaaaagattgaattgataaaaaaaatacttgaatcatccggagat
tctgaaatagatgaaaacgaaattcgacttaaaaacatgaatatggctgaattaaaagag
gttgctgaaaatttaggaatagaaaaaccatataaatataaaaaatccgaacttattgaa
atgataaaggattatcaaaaggacgaagatgtatttgataagtacaatgaagacggggat
aatttaaaagaagaaataaatatagaagatttatccgacaatgcaactgaaataatagaa
gacatggaagatataaattatgtaggcggtattttagacttgcatcaagacggttacgga
tttttaagaattaataattatcttcccggcgaaggagatatctatgtatcaccgtctcaa
ataagaaggttcagactcagaaacggcgatgaagtagttggaataatcagaccatcaaag
ccaaatgaaagctacaacgctcttatttatataaaatcagtaaacggtcaaaatccggat
agttcaaaaaacagaccacatttcgaaaaattgattcctctttatcccagacaaaagtta
attttggaaaacaatcctgaagaccttgcgacgagacttatggatttaatttcaccaata
ggcaaggggcaaagaggccttattgtctctcaaccgaaaagtggtaagacaactctttta
aagaaaatcgcaaaatccatttcaaacaattatcctgaagtgaaattgatagttttgtta
atagatgaaagacctgaagaagtaacggatatgcagagatctgtaaagggagaagtagtt
tattcaacctttgacgaacaacccaaaaatcacacaagagttgctgaaaatgttttggag
agagcgaaaagattggttgaaagtgggcaggatgtagtcgttttaatggattccttgacc
agacttgcaagagcttacaaccttgtaacaccaccaagcggcaagactttatcaggtggc
ttggatccattatccttacacaagcctaaaagatttttcggagcggccagaaatatagaa
gaaggcggttctcttacgatacttgcgacagcattaatagaaacaggctcaagaatggat
gacataatttttgaagaatttaagggtacaggaaatatggaggttcatcttgatagaaag
ctttcagaaagaaggatatttcccgcaattgacatatataaaagcggaacgagaaaagaa
gagctgcttttaacagatgaagaacttaatttttcttggaagatcagaaaagccatgaat
caagatatgaccactgaagttacagaaactcttttggacaatttgacaaagtacagagcc
aataaagaatttttaaatgcgatgaaggataaatttaacaaatatgaatga
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