Peptoniphilus sp. ING2-D1G: ING2D1G_0857
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Entry
ING2D1G_0857 CDS
T03807
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
ped
Peptoniphilus sp. ING2-D1G
Pathway
ped03030
DNA replication
ped03430
Mismatch repair
ped03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ped00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ING2D1G_0857 (polC)
03430 Mismatch repair
ING2D1G_0857 (polC)
03440 Homologous recombination
ING2D1G_0857 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ped03032
]
ING2D1G_0857 (polC)
03400 DNA repair and recombination proteins [BR:
ped03400
]
ING2D1G_0857 (polC)
Enzymes [BR:
ped01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ING2D1G_0857 (polC)
DNA replication proteins [BR:
ped03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ING2D1G_0857 (polC)
DNA repair and recombination proteins [BR:
ped03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ING2D1G_0857 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
HHH_6
Rv2179c-like
RNase_H_2
DEDDh_C
tRNA_anti-codon
DNA_pol3_a_NI
DNA_pol_A_exo1
YhfH
Motif
Other DBs
NCBI-ProteinID:
CDZ75016
UniProt:
A0A090HXN4
LinkDB
All DBs
Position
I:complement(830199..834449)
Genome browser
AA seq
1416 aa
AA seq
DB search
MINLNDVLNKLKIELKDYYKAIEVDKISLDAENMNLFFDFCLKENIEKQKLKILENEISS
RLKSFRVFFNYEIINLEKNIGIKELAESLIIKHNPSFNAFIDQIEIDDNLEKKELTIVFP
NNTLYNNALNSGLMEKLSMALDEDEYEVFFKCDKDYCKLEECDVDDYIKNLDEEEDQIVK
TINLKIKPESNKNISKEKFKYGKKSLLQKTDLKNIDSNSGKVTVEVNVFKIDIRELKNEK
TLVSLSITDNTSSIIAKVFLKKDKSEEFITNVKEGGHYIITGDVQFDNFIKDDVIMIKYL
EPTNKFIREDNSEEKRVELRLHTKMSTMNGVSSFESFVKRSKYWGMNSIAITDVADVQGF
SDAMEASEKYDIKIIYGLDGNFVDDQEEILKIRKKTFDSYVVFDIETTGFSPRTDKITEI
GAVKLKNGKIIDKFSKLINPKKVIPKRVEELTGLSNVLLENEPSIDEVIYDFSEFCNNSI
LVAHNAKFDISFIKREFESHGIKFDHSVLDTLSLARAVVKDSKRFNLSTLSKKLGVSLVG
AHRAVNDAQATSEVFIKLLEIAKKEHGIEDILNINDLVKNIDSSLLFESPVSILVKTQAG
MKNLYKLVSKSHLSYFNRVAKVPRTLLNQYREGLLIGSGNSSSILFRAIYNNESADTIKK
IASYYDYLEIQPVDNNLSFIVNDLVKDKDELKNINKKIYEVGKELNIPVVATGDAFYLDE
VDDLSRRIALSGQKVKTVENWNQPQSLYFKNTDEFLREFNYLGEEAAYDVVVKNTNIISN
SIANLKPIPDGKFPPVIEGADEDLRRICYEKAHEIYGDELPEIVENRLDKELKSIISNGY
SVLYIIAQKLVAKSNEDGYYVGSRGSVGSSFVATMSSITEVNPLPPHYICKNCKHSEFIE
GGDYGSGVDLPDKKCPVCGSEMFKDGHDIPFEVFLGFKGDKEPDIDLNFAGEYQPRAHKY
TEELFGKGYVFRAGTIGTIAEKTAYGYVKSYFGETSLRDAEIERLVKNIVGVKRTSGQHP
GGVMICPKSNDIFDFTPIQYPADDESSGVITTHFDYNFIHGKILKLDILGHDGPTIIKML
EDFTGVDSSKLSLNDKQTLSLFSSSDALNLNKDIFNTSTGTLGIPEFGTNFVKQMLMETK
PQNFAELVRISGLSHGTDVWTNNAQDLVKDGRAKLSDVICTREDIMLYLIRAGAENKMAF
DTMERVRKGRGLTEEQIEIMNKLDLPEWYIESCKKIKYMFPKAHAVAYVTLSFRIAYFKL
NYPLAFYATYFSIKLQDFDGELIIKGQEAVKAKIDEFKNSETKLSTKEKGQLTILEVVLE
MFARGFEFENVDLYKSKSDKFSIKDGKVLFPFRAYVGIGDQIACNIEECSKHTEYLSIED
FVNKTKATKSVVEILKKNNVLKDLPDTNQLSLFNLF
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
ttgataaatttaaatgatgttttaaataaattgaaaattgaattaaaggattattacaag
gctattgaagttgataaaatatctttggacgctgaaaatatgaatttgttttttgatttt
tgtctaaaagaaaatattgaaaaacaaaaattgaaaattttagaaaatgaaatctcttcg
agactaaaaagtttcagagttttttttaattatgaaattataaatttagaaaaaaatatt
ggcataaaagaattggcggaaagtttaattattaaacacaatccttcttttaatgctttt
attgaccaaatagaaattgatgataatcttgaaaaaaaagagcttacaatagtatttcca
aacaatactttatataacaatgctttaaatagcggattgatggaaaaattatctatggct
ttagatgaagatgaatatgaagtattttttaaatgcgataaagactattgcaaattagaa
gaatgtgatgtagatgattacataaaaaatctggatgaagaagaggatcagatagtaaaa
accataaatttaaaaataaagccagaaagcaataaaaatatatcaaaggaaaaatttaaa
tacggaaagaagtcccttcttcaaaaaactgatttaaaaaatatcgattcaaattccgga
aaggtcacagtagaagttaatgtatttaaaatagatatcagagaattgaaaaatgaaaaa
acacttgtgtcattaagtattacagataacacttcttctattattgccaaagtgttttta
aaaaaagataaatccgaagaatttattacaaacgtaaaagaaggtgggcattatataatt
accggagatgttcaatttgataatttcataaaagacgatgtaataatgatcaagtatctt
gaacctacaaataagtttataagagaagataattcagaagaaaaaagagttgaactcaga
ttacatacaaaaatgtcaacaatgaatggtgtcagctcctttgaaagttttgtaaaaaga
tcaaaatattggggaatgaattctattgcaataacagatgttgcggatgtacagggattt
tccgatgcaatggaagcatctgaaaaatatgacataaaaataatttatgggttagacggg
aattttgtagatgatcaagaggaaattttaaagattagaaaaaaaaccttcgattcctat
gtagtatttgacatcgaaactaccggattttccccaagaactgataaaattactgaaatt
ggggcggttaaattaaaaaatgggaaaataatagataaattttcaaaattaatcaatcca
aaaaaggtgattccaaaaagagtcgaggaattgacagggctgagcaatgtcctacttgaa
aatgaaccgtcaatagatgaagtaatttatgatttttctgaattttgtaataacagcata
ctggttgcccacaatgcaaaattcgatatttcttttattaaacgtgaatttgaaagtcat
ggaattaaatttgatcattctgttttagataccttatcacttgcaagagctgttgttaag
gactcaaaaagatttaatttgtcaactctttcaaaaaaactgggagtatctcttgttggt
gcacatagagctgtaaatgatgcacaagctacatctgaagtatttattaaacttcttgaa
atagccaaaaaagagcatggaatagaggatattttaaatataaatgatttagtgaagaat
atagatagttctcttttatttgaatctcctgttagtattctggttaaaactcaagccgga
atgaaaaatttgtataaattggtgagcaaatctcatctaagttattttaatagagtcgct
aaagtcccaaggactcttttaaatcaatatagagaagggttattgataggaagcgggaac
tcttcgtctattttatttagagcaatatataacaatgaaagcgccgacacaataaaaaaa
atagcatcctattatgattatttggaaattcaacctgttgataataacctgagttttatt
gtaaatgacttagtaaaagataaagatgagttaaaaaatattaataaaaaaatttacgaa
gtgggaaaagaactgaacattcccgttgttgcaacaggcgatgccttttatttagatgaa
gtggatgatttatcaaggagaatagcattaagcggtcaaaaagttaaaactgtagaaaat
tggaatcaaccacaatctctttattttaaaaataccgatgagtttttaagggaatttaac
tatttgggagaagaagcagcctatgatgttgtagttaaaaatacaaatataatctcaaat
tccattgctaatttaaaacctatacctgatggaaaatttccccctgttattgaaggtgca
gatgaagatttaagaagaatttgctacgaaaaggcacatgaaatatatggagatgaattg
ccggaaatagttgaaaatagattggataaagaattaaaatccataatttcaaatggatac
tcagtattgtatataatagctcaaaaattagttgctaaatcgaatgaagatggatattat
gtaggctcaaggggctcagtaggttcttcctttgtggctacaatgagctctattacagaa
gtaaatccattaccacctcactatatatgtaaaaattgtaaacattctgagtttattgag
ggaggagattatggatccggtgtggatttacctgataaaaaatgccctgtttgtggttct
gaaatgttcaaagatggacatgatataccatttgaagtttttcttggatttaaaggagac
aaagagcctgatatagatttaaattttgccggagaatatcaaccaagagcacataagtac
acagaagaattatttgggaaagggtatgtttttagagctggaactataggcaccattgca
gaaaagaccgcctacggttatgtaaaatcttattttggagaaacatctttaagagatgct
gaaattgaaagacttgtaaaaaatattgtaggtgtaaagaggacatcaggtcaacatccc
ggaggagtaatgatatgcccaaagagtaatgatatatttgattttactccgattcagtat
cccgcagatgatgaaagctcaggagttataacaactcattttgattataacttcatacat
gggaaaatactcaaacttgacattttaggtcatgacggtcctacaataataaaaatgctg
gaagattttacaggggtggattcaagcaagctaagccttaatgacaaacagacgctttct
ttgttttcaagtagcgatgcattaaacttaaacaaagatattttcaacacctcaacggga
acattgggaatacctgaatttggaactaattttgtaaaacaaatgctaatggaaaccaaa
cctcaaaattttgcagagctcgtcaggatatcgggtctttctcacggcacggatgtttgg
acaaataatgcgcaagatttggtaaaagatggaagagccaagctgtccgatgtaatctgt
acgagagaagatataatgctttatctgataagggctggagcagaaaacaaaatggccttt
gatacaatggaaagagttagaaaaggcaggggtttgacagaggaacaaatagagataatg
aataagcttgatttaccggaatggtatatagaatcttgcaaaaaaataaaatacatgttt
ccgaaagcgcatgctgtagcctatgtaacattatcttttagaatagcttattttaaatta
aattatcctcttgcattttatgcgacatatttttcaataaaacttcaagattttgatgga
gaacttataattaaaggacaggaagcagtaaaggctaaaattgacgaatttaaaaattct
gaaacaaaattaagtacaaaagaaaagggtcaattaactatacttgaagtagtacttgaa
atgtttgcgcgcgggtttgagtttgaaaatgtagatttatataaatcaaaaagtgataaa
ttttcaattaaagacggcaaagtactttttccatttagggcatatgtaggaataggagat
caaatagcttgtaatattgaagaatgttctaaacatacagaatatttgtcaatagaagat
tttgttaataaaacaaaagcaactaaatctgttgtagaaattttaaaaaagaacaatgtc
ttaaaagatttacctgataccaaccaattgagtttatttaatttgttttaa
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