Peptoniphilus sp. ING2-D1G: ING2D1G_1156
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Entry
ING2D1G_1156 CDS
T03807
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ped
Peptoniphilus sp. ING2-D1G
Pathway
ped03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ped00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ING2D1G_1156 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ped03021
]
ING2D1G_1156 (rpoC)
03400 DNA repair and recombination proteins [BR:
ped03400
]
ING2D1G_1156 (rpoC)
Enzymes [BR:
ped01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ING2D1G_1156 (rpoC)
Transcription machinery [BR:
ped03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ING2D1G_1156 (rpoC)
DNA repair and recombination proteins [BR:
ped03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ING2D1G_1156 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Peptidase_M23
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
CDZ75296
LinkDB
All DBs
Position
I:complement(1108240..1111827)
Genome browser
AA seq
1195 aa
AA seq
DB search
MSEHELFHSIKIGLASPEKIRQWSYGEVKKPETINYRTLKPEKEGLFCEKIFGPTKDWEC
SCGKYKRVRYKGVVCEKCGVEVTKVKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRVLEKILYFASFVVTRVNPGETPLYVKQILSEAEYREYKSEFKDKFEAKMGAEAIKDL
LLQIDLNEESKNLTDELKAATGQKKIRISRRLEVIEAFIKSNNKPEWMILDAIPVIPPDL
RPMVQLDGGRFATSDLNDLYRRIINRNNRLKKLLDINAPDIIVRNEKRMLQEAVDALIDN
GRRGRAVTGPGNRPLKSLSEMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKFYQCGLP
RNMALELFKPFVMRELVARGHAHNIKSAKRLVERAKSEVWDVLEDVIKDHPVLLNRAPTL
HRLGIQAFEPVLVEGKSIKLHPLACTAYNADFDGDQMAVHLPLSTEAQAEARLLMLSTNN
ILALKDGKPITTPTQDMVLGCYYLTVSREEKDLKGDGMIFMDFDELMHAYYSNKLHLHAK
VGMRKYADENDKLGKILYSTAGRFIMNDFIPQDLGFVDRSKDKYSLEIDQVIDKKMLGKI
IEKTYKKHGNIETAKLLDHIKEAGYHYSTIGAISISMSDIQIPDTKQEILDKAKTEVDKY
EKAFRRGFISDEERYEKVIEIWNNATEELSDEVISGFDKLNNIYIMADSGARGSKNQIRQ
LAGMRGLMASPSGRTIEVPITSNFREGLSVLEFYMSAHGSRKGLADTAIRTADSGYLTRR
LVDVSQQVIVKEEDCGTEEYITVKDFRDGNEIIEKLRDRVEGRFSAEEIKDPNTGDILVG
KNEQITDEIAEKIEELGIKEVKVRSVLGCKSKDGVCIHCYGRNLATGNVVGIGEAVGVIA
AQSIGEPGTQLTMRTFHTGGVASAVDITQGLPRVEELFEARKPKGLAVISEIDGTVNIKE
QNNKREVIITNENGESNTYNIVYGSRLKVKEGDYVEKGQELTQGSIYPQDLLRVKGVKGV
QEYIVKEVQRVYRLQGVDINDKHIEIIVRQMLSKFKILDSGDTTFLPGSLVDSYELDQKN
KEMEEKGLNPAEGEQALLGITKASLATDSFLSAASFQETTRVLTDAAIKGKEDMLTGLKE
NIIIGQLIPAGTGTRNNRKVQLSISDKLKEDYRLLENTERISLDEIKEEKSMKVE
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgaacatgaattattccattccataaaaattggattagcttcacctgaaaaaata
agacagtggtcctatggagaggtgaagaagcccgaaacaataaattatagaactcttaaa
cctgaaaaggaagggcttttctgcgaaaagatattcggtcccaccaaggactgggaatgt
agttgcggaaaatataaaagagtaagatacaagggtgtagtttgtgaaaagtgcggagtt
gaagtaacaaaggtaaaagtaagacgtgaaagaatgggacatattgaacttgcagctcct
gtatctcatatatggtattttaaaggaataccgtcaagaatgggtcttgtacttgatatg
agtcccagagttcttgagaaaatcctttattttgcctcctttgtagtaacccgagtaaat
ccgggtgaaacacctctgtatgtaaagcaaatcttatctgaagctgaatatagagaatat
aaaagtgaatttaaagataaatttgaagctaaaatgggtgcagaggcaattaaagactta
ttgttgcaaattgatttaaatgaagaatcgaaaaatttgacagatgagttaaaggctgca
acgggtcaaaagaagataagaatttcaagaagacttgaagttatagaggcttttattaaa
tcaaataacaaacccgagtggatgatacttgatgcgatacctgtaattccaccggattta
cgacctatggtccaattagatggaggtagatttgccacatctgatttaaatgatttatat
agaagaataataaacagaaataacagacttaaaaaacttttagacatcaatgcacctgac
ataatagtgagaaatgaaaaaagaatgttgcaagaagccgtagatgccttaatagacaac
ggaagacgtggaagagcggttacagggcccggaaacagacctcttaaatctctatctgag
atgcttaagggaaaacaaggtcgtttcagacaaaaccttcttggaaagcgtgttgattat
tcaggacgttcagtaatagttgtaggtcctgagcttaaattttatcaatgcggtttgcca
agaaatatggcacttgaactgtttaagccttttgtaatgagagaattggtcgcaagaggt
catgcgcacaatatcaagtcggcgaaaagattggtagaaagagcaaaatcagaggtatgg
gacgtacttgaagatgtgataaaggaccatccggtcctgttgaaccgcgctccgacgctt
catagacttggaatacaagcctttgaaccggtacttgttgaaggaaaatcaattaaactt
catccgcttgcatgtactgcatataatgcggattttgacggagaccaaatggctgtccat
ttacctctttcaacggaagctcaagcagaggcgagacttcttatgctttcaacaaataac
atcttggcgttaaaagacggcaaacccattaccactcccacacaagacatggtacttggg
tgctattatttgacagtcagcagagaggaaaaggatttgaagggcgacggtatgattttc
atggatttcgatgaattaatgcatgcctactattcaaataagcttcatctacatgcaaag
gtaggtatgagaaaatatgctgacgaaaatgataaattaggaaaaattttgtattccaca
gccggaagattcattatgaatgattttatacctcaagatttaggttttgtagatagaagt
aaagacaaatattctcttgaaatagatcaagtaatagacaaaaaaatgttgggcaaaata
attgaaaaaacctataaaaaacatggaaatatagaaacggcaaaacttcttgaccacata
aaagaagctggataccattattcaacaataggggctatttcaatatccatgtcagatata
caaataccggatactaaacaggaaatacttgataaagctaaaacagaagtcgacaagtat
gaaaaagcctttcgtcgaggatttatatctgatgaagaaagatatgaaaaagttatagaa
atttggaataatgccacagaagaactttcagacgaagttatatcaggttttgacaagtta
aataatatctatataatggcggattcaggtgcgagaggttccaaaaaccaaatcagacaa
cttgcaggtatgcgtggacttatggcttctccatcaggaagaaccatagaagttcccata
acttcaaatttccgtgagggattgtcggttcttgaattttatatgtctgctcatggttca
agaaagggacttgcggataccgctatcagaacagcggattcaggttacttgacaagaaga
cttgtagatgtttctcaacaagtaatagtaaaagaagaagattgtggcaccgaagaatat
atcacagtaaaggattttagagatggaaatgaaatcattgaaaaactaagggatagagtt
gaaggcagattttccgcagaagaaataaaagatccgaatacgggagatatattagtaggt
aaaaatgaacaaataacagatgaaatagctgaaaaaatagaagaacttggaataaaagaa
gtcaaagtaagatctgtgcttggatgtaagagcaaggacggggtatgtatacattgttac
ggtcgaaatcttgcaacgggaaatgttgtaggtataggagaggctgtaggagtaattgcg
gctcaatccatcggagaaccgggtacacaacttacaatgagaacattccatacaggtggg
gtagcatcggcagtcgatatcacacaaggtcttcctcgtgtagaagaattgtttgaagcg
agaaaacctaaagggcttgcagttatttctgaaattgacggaactgttaatataaaagaa
caaaataacaaaagagaagttataataactaacgaaaatggagaaagcaacacctataat
atagtctatgggtcaagacttaaagtcaaagaaggagactatgtagaaaaaggtcaagaa
ttaactcaaggatcaatataccctcaagatctgctccgagtaaagggagtaaagggcgta
caagaatatattgtaaaggaagttcaaagagtttacagattacaaggggtagatataaac
gataaacatattgagataatagtaagacaaatgctttctaaatttaaaattttagattcc
ggtgatacaactttccttcccggttcattagttgattcctatgagttggaccaaaagaac
aaagagatggaagaaaagggactaaatcccgcagaaggagaacaagctcttctcggaatt
acaaaagcatctttggcaactgactccttcttatcggcagcatcattccaagagacaaca
agagttttgacggacgcggcaataaaaggaaaagaggatatgcttacagggctgaaggaa
aatataataataggacagctcatacctgcaggaacgggaacaagaaacaacagaaaggtt
caattatcaataagcgataaattgaaagaggactacagacttcttgaaaatactgaaaga
atatccttagatgagataaaagaagaaaaatctatgaaagtagaataa
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