Pedobacter terrestris: ACJVDH_08855
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Entry
ACJVDH_08855 CDS
T11837
Name
(GenBank) sigma-54-dependent transcriptional regulator
Organism
peda Pedobacter terrestris
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Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA
Mg_chelatase
AAA_3
AAA_22
AAA_16
Phage_T4_Y12K
FleQ
HTH_19
Motif
Other DBs
NCBI-ProteinID:
XZP80713
LinkDB
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Position
complement(2050743..2052146)
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AA seq
467 aa
AA seq
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MAKLLIIDDERAIRSTLREILEYENYEVEDIDNGIDGLEMIKKGNFDLVLCDIKMNKMDG
MEVLEQAQILKPDLPFIMISGHGTVETAIEASKKGAFDFISKPPDLNRLLITVRNGLDRG
TLVTETKVLKRKASKTREILGQSESISKIKETIERVAPTEARVLITGANGSGKELVARWL
HEKSNRSESPLIEVNCAAIPSELIESELFGHEKGSFTSAVKQRIGKFELANGGTLFLDEI
GDMSLSAQAKVLRALQEHKITRVGGEKELDVNVRVLAATNKDLLKEIEDGNFRMDLYHRL
NVINIHVPHLTERTDDIPVIAQNFLESICGDYGIPVKRINDAGMIALQNLPWTGNVRELH
NMIERLIILSDKIITEHDVRAFANPGGGTNIGAASGAQIAQTGGPTLSSSFDSFNNFQDY
KDHAEREFIKFKLEKNNWNVSKTADEIDIQRSHLYSKIEKFGLKRAE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggccaaactattaataattgatgatgaacgggcgataagaagtaccttacgcgaaatt
ctggagtatgaaaattacgaggtagaagatatcgataacggtatcgacggcttggaaatg
attaagaaaggaaatttcgatcttgttctttgcgatattaagatgaataagatggatggc
atggaagtgcttgaacaggcgcagattttaaagccagatctgcctttcattatgatttct
ggacatggaaccgtagaaacagcaattgaagcgagtaagaaaggcgcatttgatttcatc
tctaaaccacctgatttaaacaggcttttaattaccgttagaaatggcttagaccgtgga
actttggttacagaaaccaaagttttaaaacgcaaagcgagtaaaacacgtgaaattctg
ggtcagtctgaaagtatttcaaaaattaaagaaaccatagaacgtgttgcgcctacagag
gcacgcgtactgataaccggcgcaaacggtagcggtaaagaattggtagcaagatggttg
catgaaaaatcaaacagatctgaaagccctttaattgaggttaactgcgccgctattcca
tcagaactgattgagagtgagctttttggccatgaaaaaggatcattcacctcagcggta
aaacaacgcataggaaaatttgaactggccaatggcggtactttatttttggatgaaatt
ggcgatatgagcttatctgcgcaagcaaaagtactgcgcgcgttgcaagaacataaaatt
acacgcgtaggtggcgagaaagaacttgacgtaaacgttagggttcttgcggctacaaat
aaagatttattgaaagaaattgaagacgggaatttccgtatggatttatatcaccggtta
aacgtgatcaacatacacgttccacatttgacagaacgaacggatgacattccggtaatt
gcacaaaattttctagagagcatttgcggcgactatggtataccggtaaaacggattaat
gatgccggaatgattgctttacaaaatttaccgtggacgggaaacgtacgcgagcttcac
aatatgattgagcgtttaattatcctgagcgataaaatcattacagaacatgacgttagg
gcatttgcaaaccctggcggcggtacaaatattggtgccgcaagcggcgcacaaattgcg
caaaccggcgggcctactttgtcttcgtcttttgatagctttaacaattttcaggattac
aaagaccacgcagagcgcgagtttataaaatttaagttggagaaaaacaactggaatgta
tctaaaacggccgatgaaatagatattcaacgcagtcatttatatagcaagattgaaaaa
tttggtttaaaacgcgcagagtaa
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