Pedobacter terrestris: ACJVDH_18820
Help
Entry
ACJVDH_18820 CDS
T11837
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
peda Pedobacter terrestris
Brite
KEGG Orthology (KO) [BR:
peda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peda03019
]
ACJVDH_18820
03009 Ribosome biogenesis [BR:
peda03009
]
ACJVDH_18820
Messenger RNA biogenesis [BR:
peda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACJVDH_18820
Ribosome biogenesis [BR:
peda03009
]
Prokaryotic type
rRNA processing factors
ACJVDH_18820
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
S1
DUF6305
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
XZP78428
LinkDB
All DBs
Position
complement(4401137..4402687)
Genome browser
AA seq
516 aa
AA seq
DB search
MVKELIINSTPAGVTIALIEDKQLVELHKEQINNNYAVGDIYLGRIKKIMPGLNAAFVDV
GYEKDAFLHYFDLGPQVQSLIKLTKIKRNGSVSGTLLDNLKLEADINKAGKISDVLTKNM
LVPVQIAKEPISTKGPRLSSDLSIAGRYVVLVPFSNTISISKKIKSNTERNRLKKIIESI
KPQNFGVIIRTVSEGRGVAEMQKDLLDLIAKWENFIKKLPTAEPSKRVWGEMDRSSTLIR
DILNPDFTNVYVSTPELYDDIRSYVHDISPEMEKIVKLYKQKEPIFEHFGVEKQIKNAFG
KTVNLPGGAYLVVEHTEALHVIDVNSGNRTASKENQEENALQVNKEAAKEIARQLRLRDM
GGIVVIDFIDMHKPVNRKMLFDHLRELMLLDRAKHTILPPSKFGLVQITRQRVRPEMNIV
TVEKCPACDGTGEIKASIVLMDDIENNLNYILREQNEKGITLSVHPYIEAFITKGIFSLQ
RRWFFKYGQWIKVKAQPSYYLTEFHFISSKDEEIKL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
ttggtaaaagaattaattatcaattcgactcctgccggagttaccatagcattgattgaa
gacaaacaacttgtagagcttcataaagaacaaattaataataactacgctgtaggcgat
atttatttgggccgcattaagaaaattatgccgggcctaaatgctgcgtttgtagatgtt
ggttatgaaaaagatgcatttttgcattattttgatttggggcctcaggtgcaatcttta
attaagctaactaagattaagcgaaacgggtcggtatctggtacattattagacaattta
aagctcgaagcggatataaacaaagcgggcaaaatttctgatgtactcacaaaaaatatg
ctcgtaccggtgcaaattgccaaagagcctatttctactaaaggaccgcgtttaagctcc
gatctgtctattgccggcaggtatgtggtactggtgccattctccaataccatatccata
tctaaaaagataaaaagcaataccgaacgtaatcggctaaaaaagattatcgaaagtatt
aaacctcaaaattttggggtaattatcagaaccgtttcagaaggcagaggggttgccgaa
atgcaaaaagatcttcttgatctgattgccaaatgggaaaatttcataaagaaattgcct
actgccgagccatcaaagagagtttggggcgaaatggacagatcatctacgttaatacgt
gatattctgaatcctgattttacaaacgtttacgtaagcacgccagagctttacgatgat
atccgttcttatgttcacgacatttctccggaaatggaaaaaatagtgaaactgtacaaa
cagaaagaaccgatttttgaacacttcggcgtagaaaagcaaattaaaaatgcttttggt
aaaaccgtaaacttgcccggtggggcataccttgtggtagaacacacagaagcacttcac
gttattgatgtgaatagcggaaaccgcaccgccagtaaagaaaatcaagaagagaatgct
ttacaggtaaataaggaagcggcaaaagaaattgcccgccaattgcgtttacgtgatatg
ggcggaattgtggtcatcgattttatcgatatgcacaaaccagtaaaccgcaagatgtta
tttgatcatctgcgcgaactgatgttgttagaccgggccaaacacaccatcttacctcca
agtaagtttggtttggttcaaattaccagacaacgcgttcgcccggaaatgaacattgta
acggtagaaaaatgtccggcctgcgatgggaccggagaaattaaagcaagtattgtttta
atggacgatattgaaaataaccttaattatattttaagagaacaaaacgaaaaaggaatt
acactttctgtacatccatatatcgaagcgtttatcacaaaaggaattttcagcttacaa
agacgttggtttttcaaatatggccaatggatcaaagtgaaggctcaaccttcatattat
ttgacagaatttcactttatctcctcaaaagacgaagagattaaattataa
DBGET
integrated database retrieval system
