Pedobacter sp. FW305-3-2-15-E-R2A2: AAFF35_09195
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Entry
AAFF35_09195 CDS
T11685
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
pedf Pedobacter sp. FW305-3-2-15-E-R2A2
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
AAA_5
AAA
HTH_8
Mg_chelatase
AAA_3
AAA_22
FleQ
HTH_19
Motif
Other DBs
NCBI-ProteinID:
WZV14411
LinkDB
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Position
complement(2218199..2219602)
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AA seq
467 aa
AA seq
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MAKLLIIDDERAIRSTLREILEYENYDVDDIDNGVDGLELIKKKKFDLVLCDIKMNKMDG
MEVLEQALAYSPDLPFIMISGHGTVETAIEASKKGAFDFISKPPDLNRLLITVRNALDRG
TLVTETKVLKRKASKTRDILGSSESIGKIKETIERVAPTDARVLITGANGSGKELVARWL
HEKSNRADSPLIEVNCAAIPSELIESELFGHEKGSFTSAVKQRIGKFELANGGTLFLDEI
GDMSLSAQAKVLRALQEHKISRVGGEKELEVNVRVLAATNKDLLKEIEDGNFRMDLYHRL
NVINIHVPHLTERVEDIPEIAQNFLEEICKDYGMPVKKIGDAAMAALQALPWTGNVRELH
NMIERLIILSDKAITEHDVAAFANPGGGTNIGAANSSSASTVTRTATPNYDNFNNFQDYK
DYAEKEFIKFKLEKNNWNVSKTADDIDIQRSHLYSKIEKFGLKRSTE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaattattaataattgatgatgaacgggcaataagaagcactttacgcgaaatc
ttagagtatgagaactacgatgttgacgatattgataatggtgtagacggtctggaactg
attaagaaaaagaaattcgatctggtattatgtgatatcaagatgaataaaatggacgga
atggaagtgctggaacaagcactggcctatagtcctgatcttcctttcatcatgatctcc
ggtcatggaacagtggaaaccgctatcgaagccagcaagaagggagcatttgacttcatc
tccaaaccacctgatttaaacaggctgttaattaccgtaagaaatgcgctcgacagaggt
acattggttactgaaactaaagtccttaaaagaaaagcaagtaaaacaagagatatctta
ggcagttccgaaagcattggaaagatcaaagaaaccattgaacgtgttgcccctactgat
gcccgtgtattgattaccggtgcaaatggtagtggtaaggaacttgttgcaagatggtta
catgagaaatcaaaccgtgcggacagccctttaatagaagttaactgtgctgcaatcccc
tcagaactaattgagagtgaattgttcggtcatgagaaaggatcttttacctctgcggta
aaacaaaggattggtaaatttgaactggcaaacggtggaacactttttctggatgagatt
ggcgatatgagcctttctgcacaggcaaaggtattgcgcgctttgcaggaacacaaaatc
agtcgtgtaggtggcgagaaagaactggaagtgaacgtgagggtacttgcagcaaccaat
aaagacctgctgaaagaaatcgaagacggcaacttcaggatggacttataccaccgctta
aatgtaatcaatatccatgttcctcatttaacagagcgtgtggaagatattccggagatt
gctcaaaactttctggaggaaatctgtaaagattacggcatgccggttaaaaagatcggt
gatgcagcgatggctgcgcttcaggctttaccatggacaggaaatgtacgtgagctgcac
aatatgatcgagcgtttgatcatcctgagcgacaaagccattacagaacatgatgttgcg
gcctttgcaaatcctggtggtggaacaaatatcggcgctgcaaacagttcatcagcgagt
acggttacacgtacggcaacgccaaattatgataatttcaataatttccaggattataag
gattatgcagaaaaagaattcatcaaattcaaactggaaaagaacaactggaatgtttcc
aaaactgcagacgacattgacattcagcgcagtcacctttacagtaagattgagaaattc
ggattaaaaagatccactgaataa
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