Pedobacter sp. FW305-3-2-15-E-R2A2: AAFF35_18580
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Entry
AAFF35_18580 CDS
T11685
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pedf Pedobacter sp. FW305-3-2-15-E-R2A2
Brite
KEGG Orthology (KO) [BR:
pedf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pedf03016
]
AAFF35_18580
Enzymes [BR:
pedf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
AAFF35_18580
Transfer RNA biogenesis [BR:
pedf03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
AAFF35_18580
Prokaryotic type
AAFF35_18580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
WZV10209
LinkDB
All DBs
Position
complement(4618817..4619728)
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AA seq
303 aa
AA seq
DB search
MKFEVTILGSSSATPVYNRNPSAQLLNCNEKFYLIDCGEGTQQQLIKYGFKASKIDFVFI
SHLHGDHYFGLIGLLSTMHLNGRIKPIKIFGPAALMEILDLQFKHSETVLRYPLEFVPIT
ADEPQLIFENSDLTVSTIVLNHRIPCTGFVFKEKKRLRKVIVEKLEEENIPLEYYPLLKR
GVDLTLPDGTVLLNKDYTTDSDEPRKYAYCSDTLCDGSYFEEIKDCNTLYHEATFLHEML
ERANQTHHTTALQAAETAITTGAKKLIIGHFSSRYKTLQPLLEEAVSAFENTQLAQEGST
FQI
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgaggttactattttaggtagcagctctgctacacccgtatacaatagaaat
ccaagtgcccagcttttaaactgtaatgaaaagttttacctgatcgattgcggggaagga
acccagcagcaattgatcaagtatggttttaaagcaagtaaaatagattttgtattcatc
agccaccttcacggagatcattatttcggattgatcggattgctttcgaccatgcatttg
aatggaagaatcaagccgattaagatctttggccctgcagctttaatggagattctggac
cttcagtttaaacattctgaaacggtgctccgttatcctttggaatttgtaccgatcact
gcagacgagcctcagctgatttttgaaaactcagacctgaccgtatctacaattgtactc
aaccaccggattccatgtaccggcttcgtcttcaaagaaaagaaacgattgcgtaaagta
atcgtagaaaagctggaggaagaaaatatcccgttggaatattaccctttattgaaaaga
ggggtagacctgactttaccggatggaacggtgctcctgaacaaagattatacgacggac
tcagatgagccccggaaatatgcttattgttcggataccctttgtgatggcagctatttc
gaagagatcaaagattgtaacaccctgtaccacgaagcaaccttcttacatgaaatgctg
gaacgggcgaatcaaacacatcatacgacggctttacaggccgctgagaccgcaataacc
accggggcaaagaaactgatcatcggacatttttcttccagatacaagaccttacagccc
ttattagaggaagccgtctcggcttttgaaaatacacagctggctcaggaaggaagtacc
ttccagatctga
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