Pedobacter sp. FW305-3-2-15-E-R2A2: AAFF35_26585
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Entry
AAFF35_26585 CDS
T11685
Name
(GenBank) pseudouridine synthase
Organism
pedf Pedobacter sp. FW305-3-2-15-E-R2A2
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Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
WZV11770
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Position
6550784..6552370
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AA seq
528 aa
AA seq
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MIKDNNRNSRDDKSKPGNRSTTGKSRSGTDSSYKGKGKFDDKEGKDSKFGGPRDFKPREG
DRKDFKPREGDRKDFKPREGGSRDYKPREGGSRDFKPREGGSRDYKPREGGSRDFKPREG
GSRDYKPREGDSRSFKPRGDNESRDFKPREGGSRDYKPREGGSRDFKPREGGSRDYKPRE
GGSRDFKPRGDNESRDYKPRPHSAGSSRDVPPTDKTRSYIKKDNFGSGDQPFRKFDDKKG
SASRSTDSRPFRKREDDNTRPGFKARGERTERDDSNTVMRGRKAPIPKDDGLIRLNRYIA
NSGICSRRKADELIAAGVVSVNGEAVSELGHKIDPAKDEIRYNGELLKREKKVYVLLNKP
KDYITTTDDPQERRTVMQLVDKASRERIYPVGRLDRNTTGLLLMTNDGDLADKLSHPKNG
ITKIYHVELSRSLSQGDLNKIQFGLELEDGIIKPDNVSYVTGGSKREVGIQIHSGKNRIV
RRIFEHLGYDVVKLDRVVYGNLTKKDLPRGRWRYLEEHELIQIKHLIK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaagacaacaacaggaacagtcgggatgacaagtccaaaccgggaaacagaagt
acaacaggcaaaagtcgtagtggaacagacagttcttacaaaggcaaaggcaagtttgac
gacaaagaggggaaggatagtaagtttggtggcccgagagattttaaaccaagagaaggc
gatagaaaagacttcaaaccaagagagggagacaggaaagactttaagccaagagaaggc
ggttcaagagattataaaccgagagaaggtggctcgagagatttcaaaccaagagaaggt
ggttcaagggattacaaaccgagagaaggtggctcgagagatttcaaaccaagagaaggt
ggttcaagggattacaaaccgagagagggagattcaagaagcttcaaaccacggggagat
aatgagtcgagagacttcaagccaagagaaggtggctcaagagattataagccgagagaa
ggtggatcgagagatttcaaaccaagagaaggcggttcaagagattacaagcctagagag
ggtggatcgagagatttcaaaccaagaggtgataatgagtcaagggattacaaaccaaga
ccacatagtgcaggaagctcaagagatgttcctcctacagacaaaacccgtagttatata
aagaaagacaatttcggaagtggtgatcaacctttcagaaaattcgatgataaaaaagga
tcagcttccagaagtacggacagcagaccattcagaaaaagagaagacgataatacaaga
cctggatttaaggcacgtggagaacgcactgaacgcgacgatagcaataccgttatgcgt
ggcagaaaagcgccaatccctaaagatgacggactgatccgtttgaaccgttacattgcc
aattcaggcatttgctcacgccgtaaagcggatgagctgattgcagcaggtgtcgtatct
gtaaatggagaagcagtttcggaactgggacataaaattgaccccgcgaaagatgaaatc
cgttacaacggagaattgttgaaacgcgaaaagaaagtttacgttttattgaacaaacca
aaagattacatcaccacaactgacgatcctcaggaacgtcgtactgtgatgcaactggta
gataaagcaagcagagaacgcatttatccggtaggaagattagaccgcaatacaacaggt
ctattattgatgaccaatgatggagaccttgcagataaactatcacaccctaaaaacggc
atcactaagatctatcatgtggaattgagcagaagcttaagccagggagatctgaacaaa
attcagttcggccttgaactggaagatggaatcatcaaaccagataatgtatcttatgta
accggaggcagtaaacgtgaggttggtatccagattcacagtggtaaaaatagaatcgta
agaagaatattcgaacacctgggttatgatgtggtaaaactagaccgcgttgtttatggt
aacctgactaaaaaagaccttccacgtggaagatggcgctatttagaagaacatgagttg
atccagattaaacacctgatcaaataa
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