Pedobacter sp. WC2423: AB3G38_00545
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Entry
AB3G38_00545 CDS
T10715
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
pedo Pedobacter sp. WC2423
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GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
AAA_5
AAA
HTH_8
AAA_3
Mg_chelatase
FleQ
Phage_T4_Y12K
AAA_22
AAA_16
HTH_19
Motif
Other DBs
NCBI-ProteinID:
XDC11331
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Position
complement(127072..128481)
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AA seq
469 aa
AA seq
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MAKLLIIDDERAIRSTLREILEYENYEVEDIDNGVDGLDLIKKKKYDLVLCDIKMNKMDG
MEVLEQALAYSPDLPFIMISGHGTVETAIEASKKGAFDFISKPPDLNRLLITVRNALDRG
NLVTETKVLKRRVSKTRDILGSSENINKIKETIERVAPTEARVLITGANGSGKELVARWL
HEKSHRSENPLIEVNCAAIPSELIESELFGHEKGSFTSAVKQRIGKFELANGGTLFLDEI
GDMSLSAQAKVLRALQEHKITRVGGEKELEVNVRVLAATNKDLMKEIEDGNFRMDLYHRL
NVINIHVPHLTERREDIPEIAMSFLEDICKDYGMPVKKISEAGMVALQNLPWTGNVRELH
NMIERLIILSDKIISEHEVVAFANPGGGTNIGAANHGFNGNSNGSSAGTTNYDKFTNFQD
YKDHAEREFIKFKLEKNNWNVSKTADDIDIQRSHLYSKIEKFGLKRVTE
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggctaaattattaattattgatgatgaacgtgcgataagaagcacattacgtgagatc
ttagagtacgaaaattacgaggtagaggatattgataatggagttgatggattagatctg
atcaaaaaaaagaaatacgacctggtattatgtgatataaaaatgaataagatggatggt
atggaagtgcttgaacaagcattggcctacagtcctgatttaccatttattatgatctcc
ggccatggtactgtagaaacggctattgaagccagcaaaaagggtgcttttgactttatc
tctaaaccacctgatttaaaccgtttactgattactgtcagaaatgcactggacagaggt
aacctggttactgagactaaagttctaaaacgcagagtaagtaaaacaagagatatcctg
ggcagttcagagaatatcaataaaattaaagaaacgattgaacgtgttgcccctactgaa
gcccgtgtattgattacaggtgcaaatggtagtggtaaagaactagtagcccgttggtta
catgaaaaatcacaccgttcagagaaccctttaattgaagtgaactgcgctgcaatccca
tctgaactgattgaaagtgaacttttcggtcacgaaaagggatcatttacctctgctgta
aaacagcgtatcggtaaattcgaactggccaatggtggtactttgttcctggatgaaatc
ggggatatgagtctttctgcacaagcaaaagtacttcgtgctttacaagaacataagatt
acgcgtgttggtggtgaaaaggaattagaagttaatgtacgtgtcctggctgcaaccaac
aaagacctgatgaaagaaattgaagatggcaatttcagaatggatttataccaccgttta
aatgtcatcaacattcatgttcctcatttaacagaacgccgtgaggatattcctgagatc
gcaatgagcttcctggaagatatttgtaaggattatggcatgcccgttaaaaagatcagt
gaagccggaatggttgcattgcaaaacttaccatggacaggaaacgtacgtgagttacac
aatatgattgaacgtctgattattctaagtgataagattatctctgaacatgaggttgtt
gcatttgccaatccaggtggaggaaccaacattggtgccgcaaatcatggttttaacggt
aatagcaacggttcatctgcaggaacaaccaattacgataaattcacaaatttccaggat
tacaaagatcatgcggaaagagaattcatcaagtttaaattggaaaagaacaactggaac
gtttctaaaactgcggatgatattgatattcaacgtagtcacttgtacagtaaaattgag
aaattcggcttaaaaagagtcactgaataa
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