Pedobacter sp. WC2423: AB3G38_00630
Help
Entry
AB3G38_00630 CDS
T10715
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pedo Pedobacter sp. WC2423
Pathway
pedo00300
Lysine biosynthesis
pedo00470
D-Amino acid metabolism
pedo01100
Metabolic pathways
pedo01110
Biosynthesis of secondary metabolites
pedo01120
Microbial metabolism in diverse environments
pedo01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AB3G38_00630 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AB3G38_00630 (lysA)
Enzymes [BR:
pedo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AB3G38_00630 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
XDC11347
LinkDB
All DBs
Position
143947..145098
Genome browser
AA seq
383 aa
AA seq
DB search
MFSNKDIAQFADLETPFYYYDLSLLQRSLSACAEAAKVYDFHVHYAMKANFNDTLLKKIK
EAGLGADCVSGNEVKKAIEIGFDKKRVVFAGVGKSDKEINEALDLDIFCFNVESVQELEV
INELAGKRGKVAKVAIRINPNVDAHTHHNITTGLDENKFGVNSWDLPDCVVVLKASANLE
FMGIHFHIGSQITNLDVFKNLCVRINEFAKWFEERGLLVKLINVGGGLGIDYQNPEQQIP
DFEAYFKIFNEFLEKRPNQEVHFELGRAIVGQCSSLISRVLYVKNGKSKNFIILDAGMTE
LMRPALYQAYHQIENLSKQDGGLSVKYDVVGPICESTDCFGKEVLLQETERGDLVAIRST
GAYGEVMSSHYNLRENVRVVFSK
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgttttctaacaaagatatagcacagtttgcagatttagaaacacctttttattattat
gacctgagtttattgcagcgcagcttaagtgcttgtgctgaagcggctaaggtttatgat
tttcatgtgcattatgcaatgaaggcgaattttaatgatacgctgctgaaaaaaattaaa
gaggccggtttgggcgctgattgtgtaagtggcaatgaagtgaagaaggccattgagata
ggttttgacaagaaacgggtcgtatttgctggtgtcggtaaatcggacaaggaaatcaat
gaggcgctggatctggatattttctgctttaatgtagagtctgttcaggagttagaggtc
atcaatgagcttgccggaaaaagaggaaaggtggccaaggttgccatccgtattaatcct
aatgtagatgcacatacgcatcataatattacaacgggactggatgagaacaagttcggt
gtaaattcatgggatcttcctgattgtgtggtggttttaaaggcttctgcaaatttggag
ttcatggggatacattttcatattggctcgcagatcacaaatttagatgtttttaagaat
ctttgtgtaagaatcaacgagtttgcgaaatggttcgaggagcgcgggcttctggtaaag
ctgatcaatgttggcggaggattgggtattgattatcagaatcctgagcaacagatccct
gattttgaagcttattttaagatttttaatgaatttttagagaaaaggcctaatcaggag
gttcattttgagctgggaagagcgattgtgggccagtgttcttcgctaatcagcagagtg
ctttatgtgaagaatggcaagagcaagaattttataattctggatgcaggaatgacggag
ttaatgagaccggcactttaccaggcttatcaccagatcgagaatttgagcaaacaggat
ggaggattgagtgtaaagtatgatgtggtaggcccgatttgcgagagtacggattgtttt
gggaaagaggttttgttacaggaaacggaaaggggcgatttagtggcaatcaggagtact
ggggcttatggtgaagtgatgagttcacattataatctgagggaaaatgtaagggtggtt
tttagtaagtag
DBGET
integrated database retrieval system