KEGG   Pedobacter sp. WC2423: AB3G38_00770
Entry
AB3G38_00770      CDS       T10715                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pedo  Pedobacter sp. WC2423
Brite
KEGG Orthology (KO) [BR:pedo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pedo02048]
    AB3G38_00770
Enzymes [BR:pedo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     AB3G38_00770
Prokaryotic defense system [BR:pedo02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   AB3G38_00770
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII T1R_D3-like DEAD T1RH-like_C SLFN-g3_helicase DUF5508 P22_Cro
Other DBs
NCBI-ProteinID: XDC11375
LinkDB
Position
182718..185684
AA seq 988 aa
MAFNELNSVEYYIISQLSGVNLNTTQFQEPKVSYGLQWQYKSAADLHRSVNEVLLEMELK
EALIRLNPEIHAKPELADEVIYKLRAILISVNHTGLVKANEEFFKWLGGDKTMPFGENNR
HVPIRIFDFENLNQNTYIVTNQFRIHHRETKIPDIVLCINGIPVVVGEAKTPIRPSVSWL
DGAYEIHEVYENSVPQLFVPNILSFATEGKTLYYGGIRCPLDFWAPWRLEDEDDALARRL
GLGEIGKEMGDLLHPARLLDILQNFSLFTTNNKKQRSKVIPRFQQYEGANKIVDRVKEGR
VKKGLIWHFQGSGKSLLMVFAAQKLRRAAELKSPTVIVLVDRTDLDTQISGTFNASDIPN
VEATESIKDLQRMLEQDTRKIIISMIHKFRDAKPNMNTRDNIIVLVDEAHRTQEGDLGRQ
MRAALPNAFLFGLTGTPVNKADKNTFWAFGSDEDEGGYLSRYTFQDSIRDGATLPLHFEP
RLIDVHVDKETIDQLFGEFKEEAALTDEEADALNKKSAKMAAFLKSPERIAKIVNDIATH
FKDKVAPHGFKAMIVTPDRFACTLYKEELDKYFSSEVSKIVISTTANDTLEFKEKWGINK
SQQERIVDEYNDPLSDLQFLIVTAKLLTGFDAPILQTMYLDKSIKDHTLLQAICRTNRLF
PNKTYGRIVDYFGVFDDAAKALEFDETSVKQIITNLSELRAQLPQAVKNTLIHFDGVDRT
KQGFEGLEDAQNAIKTVEKKDAFAADYKFLSKLWESLSPDNILGLYQADYKWLSQVYESV
RPASDNIGKLLWMTLGAQTTKLIHDNIHVGDIHNLDEFILDADVIEDIFNNPDPKNAKKL
EKLLVNRFKKHTGDPKFRKLSELLEELRDRAEKGLITSIEFVKELCKIAKETVQAEKDLA
DAYQEKSPKAALTELFVELKTEQTPAVVERIVADIDAIVRVVSFPGWQKTTSGEREVQKS
LRQALLKYQLHKDQILFDRAYSYIKEYY
NT seq 2967 nt   +upstreamnt  +downstreamnt
atggctttcaacgaactcaatagtgtagaatattacatcatcagtcagctctcaggagtt
aacttgaatactacacaatttcaagaacccaaggtaagctatggtttacagtggcagtat
aaatctgcagccgacttacatcgctctgtaaacgaggttttattagagatggaattaaaa
gaggctttaattcgtttaaatccagagattcatgccaagccagagcttgctgatgaagta
atttacaaactaagggcaattttaatctcagttaatcataccggcttggtaaaagcaaat
gaagaattttttaaatggctaggcggggataaaacaatgcctttcggagaaaataatcga
catgtacccatcagaattttcgacttcgaaaacctaaatcaaaatacatatatcgttacc
aaccagtttcgcattcatcatcgcgaaacaaaaatacctgatattgtactatgtatcaat
ggaatcccagttgtggttggtgaggcaaagacacccatacgcccaagtgtaagttggtta
gatggtgcttacgaaattcacgaggtgtacgaaaactcagttcctcaattgtttgtgcca
aacatactatcttttgcaacagaaggtaaaacgttgtattacggaggtatccgctgccct
ttagatttttgggcgccttggcgcttagaagatgaagatgatgctttggctcgtaggtta
ggattgggagaaataggtaaagagatgggtgatttattacatccagctcgtttgttagat
attttacaaaatttctctttgtttaccactaacaataagaaacaacgtagcaaggtaatc
cctcggtttcaacaatacgaaggtgctaacaaaattgttgatcgcgtaaaagaaggacgt
gttaaaaaaggcttaatctggcatttccaaggctctggtaagtccttattaatggttttt
gctgcacaaaagctaaggagggctgccgaattaaagagcccaaccgttattgtactcgta
gatcgcacagatttagatacccaaatttcaggcacctttaatgcgtcagacattcctaat
gttgaagccacagaaagcattaaagatttacaaagaatgttggagcaagatactcggaaa
atcatcatctcgatgatacacaagtttcgggatgcaaaacccaacatgaatacccgtgat
aacatcatcgtgctggttgatgaagcccatcgtacacaagagggagatttgggacgtcaa
atgcgagccgccttacccaatgcatttttatttggtttaacagggacgcctgtaaacaaa
gcagataaaaacactttttgggcttttggttccgatgaagatgaaggcggctatttatcc
cgttatacttttcaagattctattcgtgacggggctactcttcctcttcattttgaacct
cgtttaattgatgttcatgtagataaggaaaccatagatcagctttttggtgaatttaag
gaagaagctgcattaacggatgaagaagcagatgcattgaacaaaaaatctgcgaagatg
gctgcctttttaaaatcaccagaaagaatagcaaaaatagtgaacgatattgctacgcat
tttaaggataaagttgcaccacatggttttaaagctatgattgtaacgccagaccgattt
gcatgtacactttataaagaagagttagataaatatttctcttcagaagttagtaaaata
gtgatttctactactgcaaatgatactttggagtttaaagaaaaatggggaataaataaa
tcacagcaagaaaggatagtggatgagtataatgatccactttctgatttacaattttta
attgttactgctaaactattaacaggttttgatgcaccaattttgcaaacgatgtactta
gataagtcgatcaaagaccatacactattgcaggcaatttgcagaaccaatcgtttattt
cccaataaaacctatggtaggattgtcgactattttggagtatttgatgatgctgctaaa
gcgttggagtttgatgagacatcagttaagcaaattatcaccaatttatctgaactaagg
gcacagttgccacaagcagtaaaaaatacgttaatacactttgatggggtagatagaaca
aagcaaggctttgaaggattggaagatgcacaaaacgctattaaaacagtcgagaaaaaa
gacgcttttgctgcagattataaattcttaagtaaactatgggaatcactttctcctgat
aatattttggggctttaccaagcagattacaaatggctatctcaagtatatgagtcggta
cgtccagcttcagataatattggcaaattattatggatgaccttaggggcacaaaccact
aaattgattcatgataatatacacgtaggtgatatacataatttagatgagtttatttta
gatgctgatgtaattgaggatattttcaataacccagatcctaagaacgctaagaaacta
gaaaaattactggttaacagattcaagaaacatacaggcgatccaaagtttagaaaactt
agtgagctattagaagaactgagagacagggcagaaaaaggattgataacttcgattgag
tttgtaaaggaactttgtaaaatagcgaaagaaactgttcaagcagaaaaagatttagca
gacgcttaccaagaaaaatccccaaaagccgcattaacagaattgtttgttgaattaaaa
acagaacaaacacctgccgttgtagaacgtattgtagctgatattgatgctattgttagg
gtggttagttttcctggttggcaaaaaacaacttcaggagaaagagaagtacagaaatca
cttaggcaagcattattaaaatatcaattgcacaaagaccaaattttatttgatagggct
tatagttatataaaagaatattattga

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