Pedobacter sp. WC2423: AB3G38_02715
Help
Entry
AB3G38_02715 CDS
T10715
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pedo Pedobacter sp. WC2423
Pathway
pedo03030
DNA replication
pedo03430
Mismatch repair
pedo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB3G38_02715 (dnaE)
03430 Mismatch repair
AB3G38_02715 (dnaE)
03440 Homologous recombination
AB3G38_02715 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pedo03032
]
AB3G38_02715 (dnaE)
03400 DNA repair and recombination proteins [BR:
pedo03400
]
AB3G38_02715 (dnaE)
Enzymes [BR:
pedo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB3G38_02715 (dnaE)
DNA replication proteins [BR:
pedo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AB3G38_02715 (dnaE)
DNA repair and recombination proteins [BR:
pedo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AB3G38_02715 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Motif
Other DBs
NCBI-ProteinID:
XDC11760
LinkDB
All DBs
Position
complement(770352..773297)
Genome browser
AA seq
981 aa
AA seq
DB search
MYINVHSQYSLRFGTMSIEKIVDEAQARGINQIALTDINNSTGIMEFMRECDKRGIKPIA
GIEFRRDKKLLYVGIARNREGMKELNDFLTFHNLEQVPLPDQPPVFNNVYVIYPFNYSLG
LRNNEFFGIRFDELHLLHNRDLINLKDKLIALQPVFISDKLEYRLHEYLRGIDLNTLLTM
VTDDDKCCRTDMFLPPGQLEANFTRHSYILDNTRNLMNSCVMDYQRGKVKLNRKSYTGNK
LDDKQLLEKLAIKGMIDRYGKDNKEALKKVKHELKVIYELDFCSYFLITWDILRFASEQG
YYHVGRGSGANSTVAYCLRITDVDPIELDLYFERFLNAQRTSPPDFDLDFSWDEREDVQD
YIFKRYGREHTALLGTMTTFKDRSVIREIGKVMGLPKAEIDGFTDRSQSAVNRNNDTFKK
ILAIYEMMGNMPNQRSIHAGGVLISEEPITYYTALDLPPKGMPVVQWDMYEAELIGFDKY
DILSQRGIGHIKEAVRLVEENQRQKIDIHDVKAFMKDPNLNERLKTGNTIGCFYIESPAM
RQLLTKLACDTYLVLVAASSIIRPGVASSGMMSTYIRHHHNPEKANYLHPVMKEQLKETY
GVMVYQEDVIKICIHFAGMDGTDADILRRGMSGKYRSKIEFEKLVERFKEGAKALGRPNE
IVEEVWRQVSSFAGYSFSKAHSASFAVESYQSLYLKTYYPIEFMVAVLNNYGGFYTRWLY
VEELKKAGAIVHLPCVNHSTQVVSIVGKEAYLGFIGIQGLEIKFIELITNERNKNGLYVN
LENFIKRTGIGLEQTITLIRVGALRFTGKSKKALLWDVHLLFGAAKAKPTNHAELFVVEN
KDYSMPELINTKLEDAYHELELLGFPLSLSSFDLLHTSYRGEIKTKDLKKYVGQTIKLAG
MYVCEKTVHTKNNKKMWFGTFLDTEGSFFDTTHFPNSTPNYPFRGTGCYLIMGKVVEDFG
FPSIEIQKFAKLPILSNPVMD
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcaacgttcattctcagtacagcttacgctttggtacaatgtccatagaaaag
attgtagatgaagctcaggcaagaggcatcaatcaaatcgcattgacggatattaataat
tccaccggaataatggagtttatgcgggaatgcgataaaaggggcattaagccaattgcc
ggaattgaattcagaagggataaaaaattgctttatgtgggtattgcccgcaatagagaa
ggaatgaaagaactcaatgactttctaacttttcataacctggaacaagtaccgcttcca
gatcagcctcctgtttttaacaatgtctatgtcatctatccttttaattatagcctggga
ttaagaaataatgaatttttcggtattcggtttgatgaactgcatcttttgcataacagg
gatcttattaatctgaaggataaattgattgcattgcaacctgttttcatatcagataaa
ttagaatatcgactgcatgaatatttgagaggaattgacctcaataccttgttgacaatg
gttactgatgacgataagtgctgcagaacagatatgtttcttccgcctggtcagctggaa
gccaactttaccagacattcttatattctggataatacacggaatctaatgaacagttgt
gtcatggattaccagcgtggtaaagttaagctaaatagaaaatcatacactggaaacaag
cttgatgataagcagctgcttgaaaagttagcgatcaaaggaatgatcgacaggtatggt
aaagacaataaagaggctttaaaaaaggtaaagcatgagcttaaagtaatttatgagctt
gatttttgttcctattttctcatcacatgggatatattgagatttgcatctgaacagggt
tattatcatgttgggcggggatctggtgcaaacagtacagtagcttattgtttaagaata
acagatgtcgatccgatagagcttgatttatactttgagcgttttttgaatgcacagcgt
acttctcccccagattttgatcttgatttttcctgggatgaacgggaggatgttcaagat
tatatttttaagaggtatgggcgtgagcatactgccttattaggtaccatgacgacattt
aaagatcgctccgtgattagagaaattggtaaagtaatggggttaccgaaagcagagata
gacggttttacagatcgttcgcaatcggcggtaaatagaaataatgatactttcaaaaag
attctcgccatctatgaaatgatggggaatatgccaaaccagcgtagcattcatgccgga
ggtgtactcatatccgaagaacccattacttactatacagctttagatctcccaccaaaa
ggaatgcccgtggttcagtgggatatgtatgaagccgagctcatcggatttgacaaatat
gacatcctcagtcagagggggattggacacataaaggaagctgtgcgtttagtcgaggag
aatcaacgtcaaaaaattgatattcatgatgtaaaagcctttatgaaagatccaaatctt
aacgaacgcttaaaaactggaaatactattggctgcttttatattgaatctccggcgatg
aggcaattactaactaagctggcttgtgatacttatctcgttttggtagctgccagttca
attattcggccaggcgtggcaagttccggaatgatgtcaacttacattcgccaccatcat
aatcctgaaaaagcgaattacctccaccctgttatgaaagagcagttaaaggagacttac
ggtgtgatggtctatcaggaggacgtcatcaaaatttgtattcattttgcaggtatggac
ggtacagatgctgatatattaagacgtggcatgagtggaaaatacaggtcaaaaattgaa
tttgaaaaacttgttgaacgttttaaagaaggtgcaaaagccttgggaagaccaaatgaa
attgttgaggaggtatggcggcaggtgtcttcttttgcaggatatagtttctctaaagcg
cattccgccagtttcgctgtggaaagctaccagagtttatacctaaaaacttattatcct
atcgaatttatggtagcggtattgaacaactatggtggtttttataccagatggctttat
gttgaagaactgaaaaaggccggggcaattgtacatctcccatgcgtgaaccatagcacc
caggtagtttcaattgttggtaaagaggcttatctcggatttataggtattcagggcctg
gaaataaagtttattgaactgatcaccaatgaacgtaataaaaatgggctttatgttaat
ttagaaaatttcattaagcgtacaggaataggtttggaacaaaccataacgctcattcgc
gtaggtgctttacgctttacaggaaaaagcaaaaaagcattactatgggatgtgcatttg
ttatttggtgctgctaaagccaagccaacaaatcatgctgagctttttgtagtggaaaat
aaggactacagcatgcccgaattgatcaatacaaaacttgaagatgcttatcatgaactt
gaattattaggcttcccactcagtttatcttcatttgatctattacatacctcttacaga
ggagaaattaaaactaaagatttgaaaaagtatgtcggccagaccattaaactagctgga
atgtacgtttgtgaaaaaactgttcacactaaaaataataaaaaaatgtggtttggtact
ttcctggatacggaagggagtttctttgacaccactcatttccccaatagtacccctaac
tatccattccggggtactggatgttatctgatcatgggaaaggtggtagaagatttcggg
tttccaagtatagagatccagaagtttgcaaaacttccgattctgtctaatccggtgatg
gattaa
DBGET
integrated database retrieval system
