Pedobacter sp. WC2423: AB3G38_03760
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Entry
AB3G38_03760 CDS
T10715
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pedo Pedobacter sp. WC2423
Pathway
pedo03030
DNA replication
pedo03430
Mismatch repair
pedo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB3G38_03760
03430 Mismatch repair
AB3G38_03760
03440 Homologous recombination
AB3G38_03760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pedo03032
]
AB3G38_03760
03400 DNA repair and recombination proteins [BR:
pedo03400
]
AB3G38_03760
Enzymes [BR:
pedo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB3G38_03760
DNA replication proteins [BR:
pedo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AB3G38_03760
DNA repair and recombination proteins [BR:
pedo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AB3G38_03760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
XDC11963
LinkDB
All DBs
Position
992454..993473
Genome browser
AA seq
339 aa
AA seq
DB search
MKLNLIRPLAFFDLETTGINVGSDRIVEIAILKAMPDGSELVKTLRIHPDMPIPLQSSLI
HGIYDKDIADAPKFNEVAAEIAEFIGDADLAGYNSNRFDIPVLLEEFLRAGVDFDMTGRR
FVDVQNVFHQMEQRTLRAAYKFYCDQDIINAHSAEADIKATYHVLLAQLDRYENVDFEDK
QGNISQPVKNDVEALHAFTNMNKPVDFAGRMVFNENGEEVFNFGKHKNKTVEQVFDTEPS
YYAWMKQGDFPLYTKKKLEEIWTRWNKKKELSRAAKIPATPRPAEAAGNPVKPKPAAAQP
RPQQTGGQPRQPAPQPKKEKPAVNVTPDMLEQLKMKFGK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaatctaatccgtcctcttgctttttttgatttggaaaccacaggaattaac
gttggttctgatcgtatcgttgaaattgcaatattaaaagccatgccagatggatctgag
ctggttaaaacattacgtatccacccggatatgcctattcctttgcaatcttcgcttatt
catggaatttatgataaggatattgctgatgcgcctaaatttaatgaagtagcggcagaa
attgctgaatttattggtgatgcggatcttgcaggttacaattctaatcgttttgatatt
cctgtattactggaagaatttttacgtgctggtgtagattttgacatgaccggaagaaga
tttgtagatgtacagaatgtgtttcatcagatggaacagcgtactttgcgtgcggcttat
aaattttactgtgatcaggatattatcaatgcgcactccgcagaagcagatatcaaagcg
acttaccatgttttgcttgcacagcttgaccgttatgagaatgtagactttgaagataaa
caggggaatatttcgcaaccggttaaaaatgatgtagaggcacttcatgcttttacaaac
atgaataaacctgttgattttgcaggcagaatggttttcaatgaaaatggggaagaggtg
tttaattttggaaagcataaaaataaaactgtggaacaggtatttgataccgagccaagt
tattatgcctggatgaaacagggagattttcctttatacactaaaaagaaactggaagag
atctggacacgctggaataagaaaaaggaattgagcagagcggcaaaaatccctgcaacg
ccaagaccagctgaagcagctggtaatcctgtaaagcctaaacctgcggccgcgcaacca
agaccacaacaaaccggaggacaaccaagacaacctgctccacaacctaaaaaggaaaaa
ccagcagttaatgttactccggacatgctggaacaattaaaaatgaaattcggtaaataa
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